Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0004101 Rosa chinensis HOM05D002065 ORTHO05D002050 9.0e-30 132.9 65 100.0
MD05G1340600 Malus domestica HOM05D002065 ORTHO05D002050 6.9e-14 80.1 56 71.4
Prupe.4G027000 Prunus persica HOM05D002065 ORTHO05D002050 4.5e-13 77.4 59 67.8
Eucgr.D00820 Eucalyptus grandis HOM05D002065 ORTHO05D002050 7.6e-13 76.6 60 55.0
Duzib235G0538 Durio zibethinus HOM05D002065 ORTHO05D002050 1.0e-12 76.3 59 61.0
Manes.17G029300 Manihot esculenta HOM05D002065 ORTHO05D002050 1.3e-12 75.9 58 65.5
FAN21G3944 Fragaria x ananassa HOM05D002065 ORTHO05D002050 1.7e-12 75.5 59 62.7
MD10G1314100 Malus domestica HOM05D002065 ORTHO05D002050 2.2e-12 75.1 57 66.7
Prupe.4G026900 Prunus persica HOM05D002065 ORTHO05D002050 2.2e-12 75.1 60 65.0
COL.COLO4_31720 Corchorus olitorius HOM05D004864 ORTHO05D005393 5.0e-12 73.9 60 58.3
FAN25G0723 Fragaria x ananassa HOM05D002065 ORTHO05D002050 6.5e-12 73.6 59 62.7
QL05p075313 Quercus lobata HOM05D002065 ORTHO05D002050 6.5e-12 73.6 59 61.0
Duzib192G0918 Durio zibethinus HOM05D002065 ORTHO05D002050 4.2e-11 70.9 60 55.0
Thecc.06G213400 Theobroma cacao HOM05D002065 ORTHO05D002050 4.2e-11 70.9 60 55.0
CSS0011359 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 7.2e-11 70.1 55 60.0
FvH4_3g02720 Fragaria vesca HOM05D002065 ORTHO05D002050 9.3e-11 69.7 58 58.6
CiPaw.09G085400 Carya illinoinensis HOM05D002065 ORTHO05D002050 3.5e-10 67.8 58 55.2
Gohir.A10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 3.5e-10 67.8 58 55.2
Gohir.D10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 4.6e-10 67.4 58 53.4
Gorai.011G017400 Gossypium raimondii HOM05D002065 ORTHO05D002050 4.6e-10 67.4 58 53.4
TWI38G0471 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 4.6e-10 67.4 60 56.7
TAR629G2849 Trochodendron aralioides HOM05D002065 ORTHO05D002050 4.6e-10 67.4 58 60.3
Hma1.2p1_0729F.1_g209610 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 6.1e-10 67.0 60 53.3
Rhsim13G0158100 Rhododendron simsii HOM05D002065 ORTHO05D002050 7.9e-10 66.6 53 60.4
RcHm_v2.0_Chr5g0004121 Rosa chinensis HOM05D002065 ORTHO05D002050 7.9e-10 66.6 59 57.6
CiPaw.09G086400 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.0e-09 66.2 58 53.4
Ciclev10016810m.g Citrus clementina HOM05D002065 ORTHO05D002050 1.8e-09 65.5 60 56.7
Gohir.A06G144950 Gossypium hirsutum HOM05D002065 ORTHO05D002050 3.0e-09 64.7 59 52.5
Gohir.D06G151332 Gossypium hirsutum HOM05D002065 ORTHO05D002050 3.0e-09 64.7 59 52.5
Gorai.010G176400 Gossypium raimondii HOM05D002065 ORTHO05D002050 3.0e-09 64.7 59 52.5
Lj1g0010741 Lotus japonicus HOM05D002065 ORTHO05D002050 5.1e-09 63.9 56 58.9
Cfa021640 Carpinus fangiana HOM05D002065 ORTHO05D002050 8.7e-09 63.2 53 58.5
Haze_06727 Corylus avellana HOM05D004864 ORTHO05D005393 8.7e-09 63.2 53 58.5
Haze_06730 Corylus avellana HOM05D004864 ORTHO05D005393 8.7e-09 63.2 53 58.5
PGR004G0337 Punica granatum HOM05D002065 ORTHO05D002050 1.5e-08 62.4 48 58.3
Potri.004G023400 Populus trichocarpa HOM05D002065 ORTHO05D002050 4.3e-08 60.8 60 51.7
Aqoxy4G02006 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 5.7e-08 60.5 55 49.1
MBI18_g06812_MAGBIO Magnolia biondii HOM05D004864 ORTHO05D002050 1.6e-07 58.9 58 46.6
Sabra04G0012800 Salix brachista HOM05D004864 ORTHO05D005393 1.6e-07 58.9 59 49.2
Glyma.11G003000 Glycine max HOM05D002065 ORTHO05D002050 2.2e-07 58.5 58 51.7
VMungo1215G2268 Vigna mungo HOM05D002065 ORTHO05D002050 8.2e-07 56.6 54 53.7
Medtr7g109260 Medicago truncatula HOM05D002065 ORTHO05D002050 1.1e-06 56.2 57 50.9
Dinv18891 Davidia involucrata HOM05D002065 ORTHO05D002050 3.1e-06 54.7 47 55.3
MBI18_g40467_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 3.1e-06 54.7 58 48.3
TPR.G20296 Trifolium pratense HOM05D002065 ORTHO05D002050 5.3e-06 53.9 58 48.3
Actinidia05537 Actinidia chinensis HOM05D002065 ORTHO05D002050 6.9e-06 53.5 47 51.1
Actinidia26952 Actinidia chinensis HOM05D002065 ORTHO05D002050 6.9e-06 53.5 46 52.2
TPR.G20274 Trifolium pratense HOM05D002065 ORTHO05D002050 6.9e-06 53.5 58 48.3


User provided reference genes

Program Settings