Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 4.6e-37 157.5 88 100.0
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 3.9e-20 101.3 73 68.5
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 1.5e-19 99.4 72 68.1
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-17 92.8 73 64.4
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 3.1e-17 91.7 73 61.6
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-16 89.7 75 60.0
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 1.5e-16 89.4 73 61.6
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.0e-16 89.0 72 61.1
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 5.9e-16 87.4 72 59.7
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.0e-15 86.7 72 59.7
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.0e-15 84.3 74 55.4
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.9e-14 82.4 73 56.2
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 7.2e-14 80.5 73 54.8
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 9.4e-14 80.1 73 58.9
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 3.6e-13 78.2 73 53.4
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 7.9e-13 77.0 73 53.4
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.9e-13 77.0 73 50.7
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-12 76.6 73 50.7
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.0e-12 76.6 73 53.4
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 6.7e-12 73.9 72 52.8
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.7e-12 73.9 67 53.7
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.3e-11 71.6 75 53.3
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 3.3e-11 71.6 67 52.2
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.3e-11 71.6 67 52.2
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 7.4e-11 70.5 72 48.6
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-10 69.7 73 49.3
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 1.3e-10 69.7 72 48.6
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-10 69.7 72 48.6
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-10 69.7 72 48.6
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.2e-10 68.9 61 59.0
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 2.2e-10 68.9 66 53.0
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.8e-10 67.8 59 59.3
FvH4_6g06990 Fragaria vesca HOM05D000003 ORTHO05D006737 1.8e-09 65.9 48 58.3
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.1e-09 65.1 68 48.5
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 4.1e-09 64.7 63 52.4
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 6.9e-09 63.9 71 47.9
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 6.9e-09 63.9 74 44.6
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 9.1e-09 63.5 73 43.8
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 9.1e-09 63.5 72 47.2
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-08 63.2 62 53.2
RcHm_v2.0_Chr5g0036711 Rosa chinensis HOM05D000003 ORTHO05D006737 1.2e-08 63.2 68 50.0
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 1.5e-08 62.8 73 45.2
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 1.5e-08 62.8 56 57.1
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 2.0e-08 62.4 73 43.8
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 3.4e-08 61.6 71 40.8
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 4.5e-08 61.2 73 43.8
FAN19G0368 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.5e-08 61.2 69 43.5
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 4.5e-08 61.2 73 42.5
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 5.9e-08 60.8 75 40.0
FAN04G0671 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.7e-08 60.5 69 40.6
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.7e-08 60.5 73 43.8
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-07 59.3 71 40.8
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.2e-07 58.9 73 43.8
RcHm_v2.0_Chr4g0423161 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-07 58.9 68 45.6
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 2.9e-07 58.5 72 44.4
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 2.9e-07 58.5 67 47.8
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 3.8e-07 58.2 66 45.5
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 1.1e-06 56.6 41 53.7
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-06 56.6 88 40.9
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-06 56.2 72 37.5
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 1.9e-06 55.8 72 43.1
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 2.5e-06 55.5 73 37.0
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 3.2e-06 55.1 73 37.0
FAN03G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.2e-06 54.7 67 41.8
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 5.5e-06 54.3 68 38.2
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 5.5e-06 54.3 66 43.9


User provided reference genes

Program Settings