Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0003271 Rosa chinensis HOM05D058191 ORTHO05D020700 5.4e-40 167.2 82 100.0
RcHm_v2.0_Chr5g0057531 Rosa chinensis HOM05D058191 ORTHO05D020700 1.3e-38 162.5 82 97.6
RcHm_v2.0_Chr5g0031741 Rosa chinensis HOM05D000007 ORTHO05D000039 4.5e-18 94.4 57 84.2
RcHm_v2.0_Chr1g0348511 Rosa chinensis HOM05D000007 ORTHO05D000039 6.0e-15 84.0 57 73.7
RcHm_v2.0_Chr5g0031801 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-14 82.4 57 73.7
FAN16G0092 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.0e-14 81.6 57 70.2
FAN11G1989 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.9e-14 81.3 57 71.9
FvH4_3g18911 Fragaria vesca HOM05D000007 ORTHO05D000039 5.1e-14 80.9 58 75.9
FAN11G2343 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.7e-14 80.5 58 77.6
FvH4_3g18890 Fragaria vesca HOM05D000007 ORTHO05D000039 1.9e-13 79.0 58 75.9
RcHm_v2.0_Chr5g0031731 Rosa chinensis HOM05D000007 ORTHO05D000039 7.4e-13 77.0 57 66.7
FvH4_3g18910 Fragaria vesca HOM05D000007 ORTHO05D000039 4.8e-12 74.3 57 66.7
FvH4_3g18950 Fragaria vesca HOM05D000007 ORTHO05D000039 6.2e-12 73.9 57 63.2
FvH4_3g16860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.1e-11 73.2 57 64.9
FvH4_3g18860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.8e-11 72.4 57 59.6
FAN28G1446 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-10 68.9 57 63.2
Prupe.4G150700 Prunus persica HOM05D000007 ORTHO05D000039 2.6e-10 68.6 59 62.7
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.4e-10 68.2 53 66.0
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 3.4e-10 68.2 59 64.4
FvH4_3g18870 Fragaria vesca HOM05D000007 ORTHO05D000039 5.8e-10 67.4 57 66.7
FAN21G3072 Fragaria x ananassa HOM05D000007 ORTHO05D020700 5.8e-10 67.4 57 66.7
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 7.6e-10 67.0 52 61.5
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 1.0e-09 66.6 59 59.3
FAN19G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.7e-09 65.9 57 59.6
FAN11G3902 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.8e-09 64.7 57 64.9
FvH4_1g04040 Fragaria vesca HOM05D000007 ORTHO05D000039 1.1e-08 63.2 57 57.9
MD11G1031100 Malus domestica HOM05D000007 ORTHO05D000039 5.5e-08 60.8 60 56.7
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 9.3e-08 60.1 50 60.0
FvH4_3g18920 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-07 59.7 52 53.8
FAN16G0172 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.7e-07 58.5 62 50.0
MD03G1028200 Malus domestica HOM05D000007 ORTHO05D000039 3.5e-07 58.2 64 54.7
FvH4_1g04460 Fragaria vesca HOM05D000007 ORTHO05D020700 4.6e-07 57.8 57 52.6
FAN11G3730 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.6e-07 57.8 63 47.6
Prupe.4G151100 Prunus persica HOM05D000007 ORTHO05D000039 4.6e-07 57.8 59 54.2
MD05G1206600 Malus domestica HOM05D000007 ORTHO05D020700 6.1e-07 57.4 59 50.8
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 1.0e-06 56.6 59 54.2
RcHm_v2.0_Chr5g0031771 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-06 55.8 51 54.9
FAN28G1507 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.3e-06 55.5 62 46.8
FvH4_3g16840 Fragaria vesca HOM05D000007 ORTHO05D000039 3.0e-06 55.1 59 49.2
FvH4_3g42390 Fragaria vesca HOM05D000007 ORTHO05D000039 3.0e-06 55.1 62 46.8
FAN11G3667 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.0e-06 55.1 59 49.2
FAN21G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.0e-06 55.1 59 49.2
FAN21G3753 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.0e-06 55.1 59 49.2


User provided reference genes

Program Settings