Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0003151 Rosa chinensis HOM05D002890 ORTHO05D005855 2.0e-84 315.8 177 100.0
RcHm_v2.0_Chr5g0003041 Rosa chinensis HOM05D002890 ORTHO05D005855 1.3e-83 313.2 177 98.9
RcHm_v2.0_Chr5g0003101 Rosa chinensis HOM05D002890 ORTHO05D005855 3.6e-81 305.1 177 97.2
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 2.1e-73 279.3 164 95.7
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 5.8e-47 191.4 164 73.2
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 3.8e-46 188.7 164 73.8
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 8.4e-46 187.6 168 74.4
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 1.2e-20 104.0 183 49.2
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 1.5e-18 97.1 154 51.3
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 1.7e-14 83.6 138 53.6
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 8.4e-14 81.3 162 49.4
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 1.2e-12 77.4 150 49.3
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 1.2e-12 77.4 138 52.2
CiPaw.10G071000 Carya illinoinensis HOM05D002890 ORTHO05D005855 6.7e-11 71.6 182 43.4
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 8.7e-11 71.2 188 44.1
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 8.7e-11 71.2 188 44.1
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.1e-10 70.9 189 42.3
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 9.7e-10 67.8 131 41.2
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 4.8e-09 65.5 127 48.0
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 6.3e-09 65.1 186 34.9
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 8.2e-09 64.7 126 49.2
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 5.3e-08 62.0 83 43.4
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 2.0e-07 60.1 164 31.7
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 2.0e-07 60.1 126 38.1
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 1.0e-06 57.8 72 50.0
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 1.0e-06 57.8 83 49.4
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 1.3e-06 57.4 126 44.4
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 3.8e-06 55.8 81 42.0
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 3.8e-06 55.8 134 38.1
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 3.8e-06 55.8 134 37.3
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 5.0e-06 55.5 119 42.9
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 8.5e-06 54.7 179 39.1


User provided reference genes

Program Settings