Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 4.2e-102 374.8 199 100.0
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.9e-79 298.9 197 83.2
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.1e-78 297.0 197 83.2
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 3.2e-78 295.4 197 82.7
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 8.0e-45 184.5 202 61.9
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 8.2e-42 174.5 200 56.5
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 1.8e-41 173.3 211 56.9
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.4e-41 172.9 213 52.1
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 5.3e-41 171.8 113 73.5
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 9.1e-41 171.0 179 56.4
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.7e-40 169.5 178 57.3
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 3.5e-40 169.1 200 49.5
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 5.9e-40 168.3 201 50.2
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 7.7e-40 167.9 178 56.7
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.0e-39 167.5 193 54.9
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 3.8e-39 165.6 179 55.3
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 5.0e-39 165.2 207 51.2
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 6.5e-39 164.9 202 52.5
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 8.5e-39 164.5 141 61.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 8.5e-39 164.5 141 60.3
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.5e-38 163.7 110 72.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 3.2e-38 162.5 143 59.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 5.5e-38 161.8 109 73.4
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 5.5e-38 161.8 143 59.4
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 7.2e-38 161.4 182 52.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 7.2e-38 161.4 141 62.4
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 7.2e-38 161.4 171 53.8
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.2e-38 161.4 182 52.7
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 9.4e-38 161.0 171 52.6
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 9.4e-38 161.0 205 51.2
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.6e-37 160.2 109 73.4
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 8.0e-37 157.9 109 72.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.0e-36 157.5 157 54.8
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.0e-36 157.5 149 56.4
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.0e-36 157.5 197 50.8
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 1.8e-36 156.8 172 54.7
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.8e-36 156.8 187 54.0
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 3.0e-36 156.0 187 51.3
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 6.8e-36 154.8 109 67.0
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 8.8e-36 154.5 193 51.8
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 8.8e-36 154.5 149 53.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.2e-35 154.1 141 60.3
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.0e-35 153.3 109 68.8
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 2.0e-35 153.3 173 50.3
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.6e-35 152.9 109 69.7
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 3.4e-35 152.5 204 47.5
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 3.4e-35 152.5 198 48.5
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.4e-35 152.1 198 48.5
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 4.4e-35 152.1 188 51.1
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 4.4e-35 152.1 204 47.5
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.3e-34 150.6 140 58.6
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.7e-34 150.2 141 61.0
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.7e-34 150.2 203 48.3
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 3.7e-34 149.1 213 48.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 3.7e-34 149.1 158 55.7
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 4.8e-34 148.7 194 47.9
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 6.3e-34 148.3 171 53.8
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 8.3e-34 147.9 98 74.5
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.4e-33 147.1 179 51.4
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.4e-33 146.4 187 49.2
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.1e-33 145.6 182 49.5
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.1e-33 145.6 182 49.5
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 5.4e-33 145.2 112 66.1
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 5.4e-33 145.2 101 67.3
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.0e-33 144.8 187 48.7
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.2e-32 144.1 150 49.3
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.6e-32 143.7 159 52.2
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.6e-32 143.7 159 52.2
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.0e-32 143.3 199 47.7
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 2.0e-32 143.3 196 46.9
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 2.7e-32 142.9 155 52.9
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 4.5e-32 142.1 155 52.3
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 4.5e-32 142.1 116 61.2
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.0e-31 141.0 179 48.0
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.0e-31 141.0 106 65.1
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.3e-31 140.6 184 47.8
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.3e-31 140.6 109 62.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 1.3e-31 140.6 180 47.2
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.7e-31 140.2 182 45.1
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 2.2e-31 139.8 200 44.0
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.2e-31 139.8 95 70.5
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 6.5e-31 138.3 171 43.9
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.5e-30 137.1 209 44.0
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.2e-30 134.8 95 71.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 1.2e-29 134.0 99 69.7
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 3.6e-29 132.5 131 55.0
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 5.2e-28 128.6 185 41.6
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.2e-28 128.6 113 61.9
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 5.7e-27 125.2 186 47.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 3.7e-26 122.5 115 58.3
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.4e-25 120.6 103 56.3
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.8e-25 120.2 103 54.4
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.4e-25 119.8 133 47.4
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.1e-25 119.4 78 75.6
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.9e-23 112.8 78 74.4
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 3.8e-23 112.5 94 61.7
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.1e-22 110.9 88 65.9
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.0e-20 102.4 79 70.9
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 5.2e-20 102.1 62 82.3
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 1.5e-19 100.5 87 48.3
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 5.7e-19 98.6 102 49.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-18 96.3 89 52.8
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.4e-17 94.0 133 39.8
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.8e-13 79.7 142 41.5
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.9e-09 67.0 77 53.2
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.7e-08 63.2 44 68.2
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 6.6e-07 58.5 99 40.4


User provided reference genes

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