Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 2.9e-182 641.7 317 100.0
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 8.5e-158 560.5 309 88.3
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 7.5e-154 547.4 312 86.9
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 5.3e-152 541.2 304 87.2
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 7.2e-141 504.2 272 90.1
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 4.7e-140 501.5 317 76.0
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 1.5e-138 496.5 302 77.2
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 7.5e-114 414.5 315 65.4
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.9e-112 409.8 338 60.4
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 1.6e-111 406.8 337 61.1
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 3.5e-111 405.6 337 59.9
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 3.0e-110 402.5 336 60.7
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 4.3e-109 398.7 326 62.0
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 1.6e-108 396.7 331 59.8
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 6.8e-107 391.3 340 59.4
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 2.6e-106 389.4 379 53.8
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 1.9e-104 383.3 314 59.2
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 5.4e-104 381.7 338 55.9
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 6.6e-102 374.8 320 57.8
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 4.3e-101 372.1 315 57.1
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 9.6e-101 370.9 306 58.8
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 1.2e-100 370.5 323 58.5
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 2.6e-98 362.8 324 57.1
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 4.4e-98 362.1 322 54.7
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 5.8e-98 361.7 320 55.9
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.7e-97 360.1 314 57.3
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 1.9e-96 356.7 295 61.4
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 1.9e-96 356.7 334 55.4
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 3.5e-95 352.4 323 54.8
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 4.6e-95 352.1 322 54.3
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 6.0e-95 351.7 341 54.3
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 7.8e-95 351.3 314 55.4
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 1.0e-94 350.9 317 56.2
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 1.7e-94 350.1 314 55.4
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 2.3e-94 349.7 338 53.0
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 3.0e-94 349.4 323 56.0
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 1.9e-93 346.7 361 51.0
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.3e-92 344.0 341 52.5
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 6.2e-92 341.7 306 54.9
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 1.4e-91 340.5 341 53.1
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 1.8e-91 340.1 325 54.5
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 4.0e-91 339.0 309 54.0
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 2.6e-90 336.3 340 50.9
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 5.8e-90 335.1 337 51.6
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 5.8e-90 335.1 327 52.0
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 9.9e-90 334.3 322 50.3
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 3.8e-89 332.4 339 50.7
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 4.9e-89 332.0 335 49.3
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 1.4e-88 330.5 322 51.6
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 1.9e-88 330.1 344 49.7
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 1.9e-88 330.1 335 51.6
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 2.4e-88 329.7 340 50.0
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 3.2e-88 329.3 331 51.4
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 2.7e-87 326.2 329 51.4
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 6.7e-86 321.6 330 53.3
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 8.7e-86 321.2 279 57.0
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 1.1e-85 320.9 343 48.1
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 1.5e-85 320.5 333 50.8
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 8.1e-84 314.7 335 47.5
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 1.1e-83 314.3 313 52.4
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 5.3e-83 312.0 333 50.2
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 1.3e-81 307.4 280 56.8
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 4.9e-81 305.4 321 49.8
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 9.3e-80 301.2 255 60.8
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 4.6e-79 298.9 326 49.4
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 1.4e-75 287.3 403 41.7
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 3.1e-75 286.2 276 54.0
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 3.8e-73 279.3 321 47.7
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 1.1e-72 277.7 326 46.0
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 7.1e-72 275.0 278 50.4
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 1.6e-71 273.9 348 43.1
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.8e-70 270.4 254 55.9
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 2.3e-70 270.0 205 63.9
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 8.7e-70 268.1 224 58.5
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 1.8e-67 260.4 320 44.4
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 2.6e-66 256.5 336 43.5
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 2.1e-63 246.9 215 56.7
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 1.3e-60 237.7 318 43.1
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.4e-59 234.2 315 41.0
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 2.6e-53 213.4 338 37.0
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 5.9e-50 202.2 199 50.8
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 1.1e-45 188.0 298 38.6
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 1.8e-43 180.6 312 36.5
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.6e-42 177.6 110 74.5
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 3.6e-39 166.4 106 74.5
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 8.0e-39 165.2 343 33.5
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.0e-38 164.9 109 68.8
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 1.2e-37 161.4 104 71.2
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.0e-37 160.6 109 67.0
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 2.2e-36 157.1 98 73.5
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 3.7e-36 156.4 113 66.4
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.6e-31 141.0 148 49.3
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 1.8e-19 100.9 143 39.2
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 4.3e-16 89.7 369 23.8
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 5.2e-14 82.8 59 67.8
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.7e-10 70.5 61 57.4
TAR636G0394 Trochodendron aralioides HOM05D007197 ORTHO05D009064 6.2e-07 59.3 166 28.9
MCO10G289 Micromonas commoda HOM05D007288 ORTHO05D009200 3.1e-06 57.0 131 32.1
arahy.Tifrunner.gnm1.ann1.LW3E0N Arachis hypogaea HOM05D040132 ORTHO05D009475 5.2e-06 56.2 55 47.3


User provided reference genes

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