Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 1.8e-50 202.2 97 100.0
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.9e-30 133.7 195 44.6
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.8e-29 132.5 198 43.9
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 5.1e-29 131.0 207 42.0
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 8.7e-29 130.2 204 42.6
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.1e-28 129.8 205 42.4
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.5e-28 128.6 198 42.9
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 1.6e-27 125.9 129 53.5
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 1.8e-26 122.5 202 41.6
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 1.5e-25 119.4 186 42.5
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 3.4e-25 118.2 185 40.5
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 3.4e-25 118.2 190 41.1
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 9.9e-25 116.7 185 41.6
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.7e-24 115.9 171 42.7
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.2e-24 115.5 150 44.7
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 2.2e-24 115.5 176 42.6
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.2e-24 115.5 188 41.0
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 2.2e-24 115.5 188 41.0
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 2.2e-24 115.5 146 43.8
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 2.9e-24 115.2 182 41.8
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 3.8e-24 114.8 196 40.3
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 1.9e-23 112.5 196 38.8
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.9e-23 112.5 203 37.4
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.4e-23 112.1 150 44.7
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.4e-23 112.1 188 40.4
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 2.4e-23 112.1 188 39.4
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 3.2e-23 111.7 191 39.3
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 3.2e-23 111.7 89 64.0
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 3.2e-23 111.7 187 39.0
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 4.2e-23 111.3 185 38.9
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 5.5e-23 110.9 182 40.1
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 5.5e-23 110.9 70 78.6
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 9.3e-23 110.2 89 65.2
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 1.6e-22 109.4 75 73.3
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 1.6e-22 109.4 198 38.4
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 2.7e-22 108.6 207 36.7
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 2.7e-22 108.6 189 38.6
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 2.7e-22 108.6 182 39.6
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 6.0e-22 107.5 191 37.7
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 6.0e-22 107.5 64 81.2
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 7.9e-22 107.1 204 36.3
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 1.0e-21 106.7 196 38.3
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 1.3e-21 106.3 196 35.7
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 2.3e-21 105.5 166 41.6
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 2.3e-21 105.5 54 96.3
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 3.0e-21 105.1 64 79.7
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 3.9e-21 104.8 174 40.2
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 3.9e-21 104.8 174 40.2
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 3.9e-21 104.8 174 40.2
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 6.7e-21 104.0 175 37.7
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 6.7e-21 104.0 174 40.2
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 6.7e-21 104.0 174 40.2
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 6.7e-21 104.0 74 73.0
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 6.7e-21 104.0 95 56.8
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 8.7e-21 103.6 188 37.2
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 8.7e-21 103.6 179 37.4
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 8.7e-21 103.6 63 77.8
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.1e-20 103.2 184 36.4
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 1.5e-20 102.8 186 36.0
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 1.5e-20 102.8 171 39.8
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 1.5e-20 102.8 171 39.8
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 1.5e-20 102.8 171 39.8
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 1.9e-20 102.4 183 38.3
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 1.9e-20 102.4 185 37.8
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 2.5e-20 102.1 181 37.0
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 2.5e-20 102.1 75 66.7
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 3.3e-20 101.7 164 37.8
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 3.3e-20 101.7 200 34.0
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 3.3e-20 101.7 190 37.4
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 4.3e-20 101.3 188 36.7
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 7.4e-20 100.5 191 35.1
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 1.3e-19 99.8 74 64.9
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 2.1e-19 99.0 198 33.8
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 2.8e-19 98.6 190 33.7
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 2.8e-19 98.6 193 34.7
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.7e-19 98.2 185 36.8
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 4.8e-19 97.8 195 34.9
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 6.2e-19 97.4 163 36.2
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 6.2e-19 97.4 163 36.2
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.1e-18 96.7 62 71.0
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 2.4e-18 95.5 188 36.2
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 2.4e-18 95.5 66 66.7
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 2.4e-18 95.5 193 32.6
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 3.1e-18 95.1 65 67.7
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 4.0e-18 94.7 201 34.3
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 5.3e-18 94.4 206 33.5
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 9.0e-18 93.6 179 33.5
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 1.2e-17 93.2 62 75.8
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 1.2e-17 93.2 69 71.0
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 2.0e-17 92.4 63 73.0
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 2.0e-17 92.4 186 33.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 3.4e-17 91.7 74 66.2
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 3.4e-17 91.7 65 69.2
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 3.4e-17 91.7 63 73.0
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 5.8e-17 90.9 79 58.2
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 5.8e-17 90.9 60 75.0
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.2e-16 89.0 62 71.0
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 6.5e-16 87.4 60 68.3
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 8.4e-16 87.0 176 31.2
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 1.9e-15 85.9 59 66.1
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 2.7e-14 82.0 61 65.6
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 6.0e-14 80.9 55 61.8
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 2.3e-13 79.0 179 33.5
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 5.1e-13 77.8 68 57.4
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 5.1e-13 77.8 46 78.3
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 3.7e-11 71.6 54 68.5
RcHm_v2.0_Chr6g0308841 Rosa chinensis HOM05D006103 ORTHO05D007468 1.4e-10 69.7 44 72.7
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 1.8e-10 69.3 62 56.5
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 1.1e-07 60.1 53 52.8
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 5.5e-07 57.8 61 47.5
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 2.7e-06 55.5 48 52.1
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 3.6e-06 55.1 48 50.0


User provided reference genes

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