Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 7.7e-62 240.4 125 100.0
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 4.7e-51 204.5 125 88.0
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 4.0e-50 201.4 123 86.2
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 6.7e-50 200.7 123 87.8
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 5.7e-49 197.6 124 80.6
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 4.8e-48 194.5 125 79.2
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 8.2e-48 193.7 124 79.0
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 1.1e-47 193.4 124 81.5
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 1.8e-47 192.6 124 79.8
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 2.4e-47 192.2 125 78.4
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 5.3e-47 191.0 123 80.5
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 5.3e-47 191.0 124 79.0
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 9.1e-47 190.3 124 79.0
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 1.2e-46 189.9 124 77.4
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 3.5e-46 188.3 124 77.4
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 3.5e-46 188.3 124 77.4
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 3.5e-46 188.3 123 79.7
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 3.5e-46 188.3 124 79.0
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 4.5e-46 188.0 124 75.8
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 5.9e-46 187.6 124 77.4
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 5.9e-46 187.6 125 82.4
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 7.7e-46 187.2 123 78.9
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 7.7e-46 187.2 124 76.6
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 1.0e-45 186.8 123 77.2
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 1.7e-45 186.0 122 77.0
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.7e-45 186.0 124 78.2
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.9e-45 185.3 124 77.4
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 3.8e-45 184.9 120 78.3
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 5.0e-45 184.5 125 76.8
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 6.5e-45 184.1 123 75.6
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 1.1e-44 183.3 126 77.0
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 1.1e-44 183.3 124 76.6
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 1.9e-44 182.6 118 78.0
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 3.2e-44 181.8 124 75.8
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 3.2e-44 181.8 124 77.4
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 4.2e-44 181.4 115 80.9
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 4.2e-44 181.4 124 77.4
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 5.5e-44 181.0 121 76.0
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 1.2e-43 179.9 124 75.0
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 1.2e-43 179.9 123 74.8
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 1.6e-43 179.5 124 72.6
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 2.1e-43 179.1 120 75.8
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 8.0e-43 177.2 126 73.0
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 1.0e-42 176.8 125 73.6
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 1.0e-42 176.8 123 74.8
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 2.3e-42 175.6 124 70.2
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 2.3e-42 175.6 117 76.1
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 2.3e-42 175.6 117 74.4
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 4.0e-42 174.9 122 74.6
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 4.0e-42 174.9 117 76.1
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 6.8e-42 174.1 124 69.4
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 8.8e-42 173.7 121 75.2
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 1.2e-41 173.3 118 74.6
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 1.2e-41 173.3 121 73.6
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 1.5e-41 172.9 121 73.6
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 1.5e-41 172.9 124 71.0
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 2.0e-41 172.6 124 74.2
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 3.4e-41 171.8 124 73.4
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 3.4e-41 171.8 121 71.9
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 4.4e-41 171.4 124 71.8
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 5.7e-41 171.0 124 71.0
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 7.5e-41 170.6 119 73.1
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 7.5e-41 170.6 122 74.6
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 9.8e-41 170.2 119 68.9
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 1.3e-40 169.9 124 71.0
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 1.7e-40 169.5 122 66.4
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 1.7e-40 169.5 124 70.2
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 2.2e-40 169.1 119 73.1
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 2.2e-40 169.1 122 68.9
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 2.8e-40 168.7 124 71.8
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 3.7e-40 168.3 119 68.1
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 3.7e-40 168.3 120 71.7
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 4.8e-40 167.9 122 68.9
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 4.8e-40 167.9 122 68.9
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 6.3e-40 167.5 122 68.0
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 6.3e-40 167.5 122 68.0
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 6.3e-40 167.5 122 68.0
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 1.1e-39 166.8 120 70.8
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 1.1e-39 166.8 95 91.6
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 1.4e-39 166.4 120 70.8
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 1.4e-39 166.4 121 70.2
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 3.1e-39 165.2 102 80.4
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 3.1e-39 165.2 106 76.4
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 4.1e-39 164.9 121 68.6
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 5.4e-39 164.5 114 71.9
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 5.4e-39 164.5 122 66.4
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 9.1e-39 163.7 108 73.1
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 9.1e-39 163.7 95 88.4
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 9.1e-39 163.7 120 70.0
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.2e-38 163.3 120 69.2
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 1.6e-38 162.9 124 67.7
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 1.6e-38 162.9 111 79.3
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.6e-38 162.9 120 69.2
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 2.0e-38 162.5 114 70.2
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 4.5e-38 161.4 119 68.9
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 1.3e-37 159.8 121 65.3
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 2.3e-37 159.1 115 67.8
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 2.3e-37 159.1 115 67.8
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 3.8e-37 158.3 115 69.6
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 1.9e-36 156.0 111 72.1
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 4.2e-36 154.8 115 66.1
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 4.2e-36 154.8 115 67.0
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 1.2e-35 153.3 124 66.1
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 2.1e-35 152.5 122 66.4
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 2.3e-34 149.1 120 64.2
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 4.0e-34 148.3 94 78.7
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 6.8e-34 147.5 105 72.4
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 1.5e-33 146.4 121 60.3
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 2.0e-33 146.0 90 78.9
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 2.0e-33 146.0 118 65.3
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 3.4e-33 145.2 122 63.9
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 3.4e-33 145.2 121 63.6
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 5.7e-33 144.4 116 66.4
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.3e-32 143.3 96 75.0
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 6.3e-32 141.0 94 73.4
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 6.3e-32 141.0 94 73.4
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 4.1e-31 138.3 92 75.0
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 7.0e-31 137.5 113 63.7
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 2.7e-30 135.6 103 68.0
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 2.7e-30 135.6 120 60.8
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 7.8e-30 134.0 118 61.9
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 7.8e-30 134.0 116 64.7
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 1.0e-29 133.7 117 65.8
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 1.0e-29 133.7 86 81.4
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 2.9e-29 132.1 121 61.2
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.9e-28 129.4 86 76.7
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 1.9e-28 129.4 107 66.4
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 3.3e-28 128.6 118 60.2
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 5.6e-28 127.9 123 57.7
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 3.6e-27 125.2 98 68.4
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 1.4e-26 123.2 98 66.3
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 1.5e-25 119.8 87 70.1
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 2.0e-25 119.4 84 70.2
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 1.9e-23 112.8 123 45.5
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 9.2e-23 110.5 89 60.7
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 3.5e-22 108.6 108 53.7
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 7.8e-22 107.5 83 67.5
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 1.0e-21 107.1 113 46.9
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 1.7e-21 106.3 124 51.6
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 3.0e-21 105.5 122 44.3
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 3.9e-21 105.1 125 46.4
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 6.6e-21 104.4 114 54.4
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 3.3e-20 102.1 113 46.0
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 4.3e-20 101.7 119 48.7
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 1.6e-19 99.8 111 45.0
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 2.1e-19 99.4 63 79.4
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 1.8e-18 96.3 107 44.9
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 6.8e-18 94.4 115 42.6
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 2.0e-17 92.8 72 69.4
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 2.0e-17 92.8 115 46.1
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 3.4e-17 92.0 108 44.4
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 7.5e-17 90.9 130 42.3
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 3.7e-16 88.6 121 44.6
ECA233G6109 Erigeron canadensis HOM05D000473 ORTHO05D001219 2.1e-14 82.8 56 69.6
Nn7g38187 Nelumbo nucifera HOM05D004760 ORTHO05D006114 8.3e-08 60.8 54 59.3
AUR62042505 Chenopodium quinoa HOM05D004760 ORTHO05D138125 1.9e-07 59.7 67 47.8


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