Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0442941 Rosa chinensis HOM05D006186 ORTHO05D029544 1.0e-159 566.6 269 100.0
FAN22G1291 Fragaria x ananassa HOM05D006186 ORTHO05D029544 5.1e-95 351.7 255 67.5
FvH4_4g33180 Fragaria vesca HOM05D006186 ORTHO05D029544 1.9e-94 349.7 255 67.8
FAN12G0508 Fragaria x ananassa HOM05D006186 ORTHO05D029544 7.4e-94 347.8 255 67.5
RcHm_v2.0_Chr4g0442821 Rosa chinensis HOM05D006186 ORTHO05D035762 1.4e-52 210.7 246 49.2
FAN12G0814 Fragaria x ananassa HOM05D006186 ORTHO05D035762 1.2e-48 197.6 247 46.2
FAN22G1356 Fragaria x ananassa HOM05D006186 ORTHO05D029358 2.7e-48 196.4 232 48.3
RcHm_v2.0_Chr4g0442851 Rosa chinensis HOM05D029379 ORTHO05D009138 1.4e-47 194.1 105 91.4
FvH4_4g33501 Fragaria vesca HOM05D006186 ORTHO05D035762 4.4e-46 189.1 232 47.0
RcHm_v2.0_Chr4g0442321 Rosa chinensis HOM05D006186 ORTHO05D009138 1.3e-45 187.6 245 48.6
FvH4_4g33310 Fragaria vesca HOM05D006186 ORTHO05D009138 2.0e-38 163.7 240 42.9
FAN12G3351 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.0e-38 163.7 240 42.9
FAN17G1298 Fragaria x ananassa HOM05D006186 ORTHO05D009138 4.4e-38 162.5 236 42.8
FAN07G0358 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.2e-37 160.2 243 41.6
FAN07G2685 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.2e-37 160.2 243 41.6
FvH4_4g33210 Fragaria vesca HOM05D006186 ORTHO05D009138 9.1e-36 154.8 241 41.1
FAN22G2271 Fragaria x ananassa HOM05D029379 ORTHO05D204255 1.6e-35 154.1 262 40.5
FAN12G3981 Fragaria x ananassa HOM05D006186 ORTHO05D009138 5.0e-34 149.1 241 40.2
MD17G1117300 Malus domestica HOM05D006186 ORTHO05D009138 6.5e-34 148.7 252 39.3
FAN22G1698 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.5e-33 146.7 243 39.5
FAN22G2351 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.6e-30 136.7 211 43.1
FAN05G1202 Fragaria x ananassa HOM05D006186 ORTHO05D009138 5.7e-30 135.6 269 37.9
RcHm_v2.0_Chr6g0265451 Rosa chinensis HOM05D006186 ORTHO05D009138 5.7e-30 135.6 248 39.9
FAN09G1945 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.7e-27 126.7 250 38.0
RcHm_v2.0_Chr1g0365181 Rosa chinensis HOM05D006186 ORTHO05D009138 2.3e-26 123.6 255 36.1
RcHm_v2.0_Chr2g0113181 Rosa chinensis HOM05D006186 ORTHO05D009138 2.9e-26 123.2 264 35.2
FvH4_3g02591 Fragaria vesca HOM05D006186 ORTHO05D009138 3.8e-26 122.9 242 38.4
RcHm_v2.0_Chr1g0365201 Rosa chinensis HOM05D006186 ORTHO05D009138 2.5e-25 120.2 255 36.5
FvH4_7g20022 Fragaria vesca HOM05D006186 ORTHO05D009138 9.5e-25 118.2 248 37.9
RcHm_v2.0_Chr1g0360131 Rosa chinensis HOM05D006186 ORTHO05D009138 3.6e-24 116.3 215 39.1
FvH4_3g02580 Fragaria vesca HOM05D006186 ORTHO05D009138 6.1e-24 115.5 240 37.9
FvH4_7g18893 Fragaria vesca HOM05D006186 ORTHO05D009138 8.0e-24 115.2 246 36.6
FAN09G3194 Fragaria x ananassa HOM05D006186 ORTHO05D009138 5.2e-23 112.5 252 35.7
RcHm_v2.0_Chr6g0257131 Rosa chinensis HOM05D006186 ORTHO05D009138 6.8e-23 112.1 251 33.1
FAN06G2274 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.4e-22 109.8 263 32.3
FAN05G5370 Fragaria x ananassa HOM05D006186 ORTHO05D009138 5.7e-22 109.0 252 35.3
FAN12G1945 Fragaria x ananassa HOM05D006186 ORTHO05D009138 8.3e-21 105.1 162 41.4
RcHm_v2.0_Chr1g0354511 Rosa chinensis HOM05D006186 ORTHO05D009138 8.3e-21 105.1 245 36.3
RcHm_v2.0_Chr6g0257771 Rosa chinensis HOM05D006186 ORTHO05D009138 7.0e-20 102.1 232 34.1
FAN12G4170 Fragaria x ananassa HOM05D029379 ORTHO05D201998 1.1e-17 94.7 260 31.5
FAN14G5836 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.6e-16 90.9 205 33.7
FvH4_2g06070 Fragaria vesca HOM05D006186 ORTHO05D012372 6.8e-15 85.5 247 31.6
FvH4_6g51091 Fragaria vesca HOM05D006186 ORTHO05D009138 1.5e-14 84.3 207 33.3
FAN06G4575 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.0e-14 84.0 248 32.7
FAN20G0553 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.0e-14 84.0 230 30.4
RcHm_v2.0_Chr6g0265471 Rosa chinensis HOM05D006186 ORTHO05D009138 3.4e-14 83.2 181 34.8
FAN21G3430 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.9e-12 77.4 137 39.4
FAN02G0039 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.1e-09 68.2 138 36.2
RcHm_v2.0_Chr2g0096151 Rosa chinensis HOM05D006186 ORTHO05D009138 1.9e-09 67.4 259 30.5
FAN03G1198 Fragaria x ananassa HOM05D006186 ORTHO05D009138 4.7e-08 62.8 149 32.9
FAN22G0855 Fragaria x ananassa HOM05D029379 ORTHO05D208547 2.6e-06 57.0 78 47.4
RcHm_v2.0_Chr5g0009421 Rosa chinensis HOM05D006186 ORTHO05D009138 7.5e-06 55.5 116 33.6
FAN10G2323 Fragaria x ananassa HOM05D006186 ORTHO05D009138 9.9e-06 55.1 71 43.7


User provided reference genes

Program Settings