Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0442851 Rosa chinensis HOM05D029379 ORTHO05D009138 9.8e-97 356.7 167 100.0
RcHm_v2.0_Chr4g0442941 Rosa chinensis HOM05D006186 ORTHO05D029544 2.9e-48 195.7 105 91.4
FvH4_4g33180 Fragaria vesca HOM05D006186 ORTHO05D029544 8.5e-32 141.0 164 51.8
FAN12G0508 Fragaria x ananassa HOM05D006186 ORTHO05D029544 2.5e-31 139.4 162 51.9
FAN22G1291 Fragaria x ananassa HOM05D006186 ORTHO05D029544 2.5e-31 139.4 148 54.1
FAN22G1356 Fragaria x ananassa HOM05D006186 ORTHO05D029358 2.3e-21 106.3 158 41.8
FAN12G0814 Fragaria x ananassa HOM05D006186 ORTHO05D035762 5.2e-21 105.1 158 41.1
RcHm_v2.0_Chr4g0442321 Rosa chinensis HOM05D006186 ORTHO05D009138 2.4e-18 96.3 130 50.0
FvH4_4g33501 Fragaria vesca HOM05D006186 ORTHO05D035762 3.1e-18 95.9 158 39.2
RcHm_v2.0_Chr4g0442821 Rosa chinensis HOM05D006186 ORTHO05D035762 1.2e-17 94.0 125 46.4
FAN22G0855 Fragaria x ananassa HOM05D029379 ORTHO05D208547 1.4e-13 80.5 68 63.2
FAN22G2271 Fragaria x ananassa HOM05D029379 ORTHO05D204255 3.0e-13 79.3 81 54.3
RcHm_v2.0_Chr6g0265451 Rosa chinensis HOM05D006186 ORTHO05D009138 3.3e-12 75.9 116 43.1
FAN12G4170 Fragaria x ananassa HOM05D029379 ORTHO05D201998 5.7e-12 75.1 64 60.9
MD17G1117300 Malus domestica HOM05D006186 ORTHO05D009138 1.3e-11 73.9 114 44.7
FAN07G0358 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.8e-11 72.8 127 41.7
FAN07G2685 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.8e-11 72.8 127 41.7
FvH4_3g02580 Fragaria vesca HOM05D006186 ORTHO05D009138 1.8e-10 70.1 112 41.1
FvH4_3g02591 Fragaria vesca HOM05D006186 ORTHO05D009138 1.8e-10 70.1 112 41.1
FvH4_4g33210 Fragaria vesca HOM05D006186 ORTHO05D009138 2.4e-10 69.7 112 45.5
RcHm_v2.0_Chr2g0113181 Rosa chinensis HOM05D006186 ORTHO05D009138 2.4e-10 69.7 114 41.2
RcHm_v2.0_Chr1g0360131 Rosa chinensis HOM05D006186 ORTHO05D009138 4.1e-10 68.9 159 34.0
FAN17G1298 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.0e-10 68.2 112 45.5
FAN12G3981 Fragaria x ananassa HOM05D006186 ORTHO05D009138 9.1e-10 67.8 112 44.6
MD17G1286200 Malus domestica HOM05D006186 ORTHO05D009138 9.1e-10 67.8 95 44.2
FvH4_7g18893 Fragaria vesca HOM05D006186 ORTHO05D009138 1.6e-09 67.0 125 38.4
FAN12G1945 Fragaria x ananassa HOM05D006186 ORTHO05D009138 5.9e-09 65.1 84 46.4
FAN09G3194 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.9e-08 62.8 125 36.8
FAN02G0039 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.8e-08 62.4 107 39.3
RcHm_v2.0_Chr1g0365181 Rosa chinensis HOM05D006186 ORTHO05D009138 3.8e-08 62.4 113 38.1
FAN05G5370 Fragaria x ananassa HOM05D006186 ORTHO05D009138 6.5e-08 61.6 125 36.8
FAN06G2274 Fragaria x ananassa HOM05D006186 ORTHO05D009138 8.5e-08 61.2 115 36.5
FAN22G2351 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.2e-07 58.2 83 49.4
RcHm_v2.0_Chr6g0257131 Rosa chinensis HOM05D006186 ORTHO05D009138 1.6e-06 57.0 112 35.7
RcHm_v2.0_Chr1g0354511 Rosa chinensis HOM05D006186 ORTHO05D009138 2.7e-06 56.2 80 48.8


User provided reference genes

Program Settings