Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0439671 Rosa chinensis HOM05D002902 ORTHO05D343542 4.5e-49 197.6 98 100.0
RcHm_v2.0_Chr3g0456561 Rosa chinensis HOM05D002902 ORTHO05D008934 1.0e-16 90.1 50 82.0
FvH4_4g00740 Fragaria vesca HOM05D002902 ORTHO05D008934 9.4e-15 83.6 50 74.0
FvH4_6g07030 Fragaria vesca HOM05D002902 ORTHO05D008934 9.4e-15 83.6 50 74.0
FAN14G0019 Fragaria x ananassa HOM05D002608 ORTHO05D003838 4.0e-13 78.2 50 70.0
RcHm_v2.0_Chr1g0345881 Rosa chinensis HOM05D002902 ORTHO05D046601 1.2e-12 76.6 50 70.0
MD12G1209600 Malus domestica HOM05D002902 ORTHO05D008934 8.3e-11 70.5 52 59.6
MD04G1196700 Malus domestica HOM05D002902 ORTHO05D008934 7.0e-10 67.4 52 57.7
Prupe.6G317000 Prunus persica HOM05D002902 ORTHO05D008934 1.2e-09 66.6 50 60.0
FAN09G2269 Fragaria x ananassa HOM05D002902 ORTHO05D008934 5.9e-09 64.3 51 58.8
FAN02G4538 Fragaria x ananassa HOM05D002902 ORTHO05D046601 2.9e-08 62.0 47 57.4
CiPaw.07G025600 Carya illinoinensis HOM05D002902 ORTHO05D008934 5.0e-08 61.2 50 58.0
Haze_04098 Corylus avellana HOM05D002902 ORTHO05D008934 1.5e-07 59.7 50 56.0
FAN05G3849 Fragaria x ananassa HOM05D002902 ORTHO05D008934 1.9e-07 59.3 35 71.4
QL03p017844 Quercus lobata HOM05D002902 ORTHO05D008934 2.5e-07 58.9 50 56.0
CiPaw.08G158500 Carya illinoinensis HOM05D002902 ORTHO05D008934 1.6e-06 56.2 46 60.9
QL93p2009_0056 Quercus lobata HOM05D002902 ORTHO05D008934 1.6e-06 56.2 50 54.0
Ca_10155_v3 Cicer arietinum L. HOM05D001164 ORTHO05D001031 2.7e-06 55.5 44 56.8
Ca_29831_v3 Cicer arietinum L. HOM05D001164 ORTHO05D001031 2.7e-06 55.5 44 56.8
Actinidia35539 Actinidia chinensis HOM05D002902 ORTHO05D008934 8.0e-06 53.9 51 52.9
Glyma.10G149700 Glycine max HOM05D002902 ORTHO05D008934 8.0e-06 53.9 44 54.5
Sc06g0005800 Simmondsia chinensis HOM05D002902 ORTHO05D008934 8.0e-06 53.9 50 52.0


User provided reference genes

Program Settings