Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0437611 Rosa chinensis HOM05D018579 ORTHO05D026109 2.9e-239 831.6 472 100.0
RcHm_v2.0_Chr6g0271311 Rosa chinensis HOM05D018579 ORTHO05D010702 4.6e-59 233.0 157 75.8
RcHm_v2.0_Chr5g0070121 Rosa chinensis HOM05D018579 ORTHO05D344823 4.3e-57 226.5 166 78.9
RcHm_v2.0_Chr5g0082561 Rosa chinensis HOM05D018579 ORTHO05D026109 8.5e-29 132.5 83 85.5
RcHm_v2.0_Chr4g0444671 Rosa chinensis HOM05D000043 ORTHO05D030548 5.3e-23 113.2 67 85.1
RcHm_v2.0_Chr1g0364151 Rosa chinensis HOM05D018579 ORTHO05D010702 1.5e-12 78.6 51 74.5
RcHm_v2.0_Chr2g0105341 Rosa chinensis HOM05D000103 ORTHO05D000049 1.2e-11 75.5 84 57.1
RcHm_v2.0_Chr7g0189981 Rosa chinensis HOM05D018579 ORTHO05D026109 6.8e-10 69.7 79 55.7
FvH4_5g35040 Fragaria vesca HOM05D010234 ORTHO05D014636 1.7e-08 65.1 86 46.5
FvH4_2g25480 Fragaria vesca HOM05D000802 ORTHO05D001074 6.3e-08 63.2 46 67.4
FAN20G1251 Fragaria x ananassa HOM05D000802 ORTHO05D001074 1.1e-07 62.4 46 67.4
FAN27G0117 Fragaria x ananassa HOM05D000802 ORTHO05D001074 1.8e-07 61.6 46 67.4
FvH4_2g03860 Fragaria vesca HOM05D010234 ORTHO05D014636 5.4e-07 60.1 75 50.7
FAN15G2233 Fragaria x ananassa HOM05D000802 ORTHO05D001074 5.4e-07 60.1 46 65.2
FAN24G2817 Fragaria x ananassa HOM05D000802 ORTHO05D001074 9.2e-07 59.3 46 65.2


User provided reference genes

Program Settings