Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0432061 Rosa chinensis HOM05D014640 ORTHO05D000343 5.5e-181 637.5 321 100.0
RcHm_v2.0_Chr5g0020111 Rosa chinensis HOM05D000475 ORTHO05D000343 6.6e-25 119.0 168 44.0
RcHm_v2.0_Chr4g0422781 Rosa chinensis HOM05D014640 ORTHO05D000001 2.4e-19 100.5 229 38.9
RcHm_v2.0_Chr7g0178941 Rosa chinensis HOM05D014640 ORTHO05D344737 4.8e-15 86.3 131 45.0
RcHm_v2.0_Chr4g0401001 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-14 83.6 111 44.1
RcHm_v2.0_Chr3g0475621 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-11 74.3 85 47.1
FvH4_5g11311 Fragaria vesca HOM05D000002 ORTHO05D000001 7.1e-11 72.4 84 46.4
RcHm_v2.0_Chr2g0141981 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-09 67.0 83 44.6
FvH4_3g07841 Fragaria vesca HOM05D000002 ORTHO05D000001 4.3e-08 63.2 87 39.1
FvH4_4g13042 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-07 61.6 87 37.9
RcHm_v2.0_Chr1g0337721 Rosa chinensis HOM05D001218 ORTHO05D016128 5.3e-06 56.2 44 68.2


User provided reference genes

Program Settings