Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.3e-274 949.1 472 100.0
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 4.2e-254 880.9 473 92.0
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.1e-249 864.8 503 86.3
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 7.0e-249 863.6 503 86.9
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.3e-247 858.6 506 86.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 4.3e-238 827.8 473 85.8
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.0e-236 823.2 465 86.5
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 2.7e-224 781.9 460 82.0
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.3e-220 768.8 465 79.1
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.2e-219 766.5 464 78.9
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 1.5e-219 766.1 472 78.4
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 4.4e-219 764.6 465 78.3
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 9.9e-219 763.5 464 78.7
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 2.2e-218 762.3 465 78.1
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 4.9e-218 761.1 475 77.5
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.9e-217 759.2 472 78.2
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 4.1e-217 758.1 470 77.4
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 4.1e-217 758.1 465 77.8
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 9.2e-217 756.9 468 76.3
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.2e-216 756.5 461 79.4
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 1.3e-215 753.1 466 77.0
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.3e-215 752.3 466 76.6
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.0e-215 751.9 461 76.1
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 6.6e-215 750.7 465 76.3
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 3.3e-214 748.4 468 76.5
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 3.3e-214 748.4 490 74.7
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 5.6e-214 747.7 461 75.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 2.8e-213 745.3 465 75.9
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 4.7e-213 744.6 463 76.7
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 6.2e-213 744.2 472 76.3
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 8.1e-213 743.8 462 76.6
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 5.2e-212 741.1 471 74.9
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.5e-211 739.6 466 75.8
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 7.6e-211 737.3 466 75.5
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 7.1e-209 730.7 463 74.7
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 7.1e-209 730.7 506 70.6
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.6e-208 729.6 463 73.9
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 2.1e-208 729.2 469 74.6
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.7e-208 728.8 468 73.9
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.0e-207 726.9 468 73.5
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.0e-207 726.9 463 74.1
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.3e-207 726.5 506 69.8
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.9e-206 722.6 467 74.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.9e-206 722.6 463 73.2
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 2.5e-206 722.2 465 73.3
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 2.5e-206 722.2 465 73.5
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.5e-206 722.2 495 71.1
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 9.6e-206 720.3 463 72.8
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 8.1e-205 717.2 552 65.2
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 3.4e-203 711.8 464 73.3
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 5.1e-199 698.0 466 72.7
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 6.6e-199 697.6 472 72.7
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.6e-197 691.8 461 70.9
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 8.1e-197 690.6 539 63.8
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 4.2e-193 678.3 499 65.1
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.3e-190 668.7 466 71.0
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 4.3e-190 668.3 462 69.3
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 4.3e-190 668.3 402 78.9
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.1e-189 666.0 467 69.2
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.8e-189 665.6 393 81.7
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 2.9e-186 655.6 462 67.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 8.4e-186 654.1 468 67.9
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 4.6e-184 648.3 459 66.0
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.3e-182 641.7 463 67.4
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 4.3e-182 641.7 469 68.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 3.4e-179 632.1 409 72.6
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 3.4e-179 632.1 409 72.6
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 4.5e-179 631.7 384 79.2
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 4.9e-178 628.2 411 71.8
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.7e-176 622.5 422 71.1
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 2.2e-173 612.8 471 65.6
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.4e-172 610.1 492 63.6
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.5e-169 599.4 426 69.7
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.0e-167 594.0 466 62.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 3.9e-167 592.0 365 78.6
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.9e-161 573.2 471 61.4
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.7e-154 550.1 333 78.7
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.2e-152 543.9 325 79.1
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.7e-150 535.0 368 70.7
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.7e-141 506.9 368 69.8
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 5.0e-122 442.2 268 76.9
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.3e-101 374.4 228 77.2
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 5.1e-74 282.7 171 78.9
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.4e-68 264.6 447 33.1
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.3e-61 241.5 154 75.3
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 2.1e-59 234.2 236 57.6
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 7.9e-59 232.3 159 74.2
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 7.2e-44 182.6 119 72.3
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 2.7e-27 127.5 375 27.2
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 4.8e-24 116.7 77 67.5
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 4.1e-23 113.6 389 26.5
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 4.0e-18 97.1 391 25.1
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.6e-17 94.4 57 80.7
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 3.4e-17 94.0 456 23.9
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 7.5e-17 92.8 417 24.5
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 4.4e-09 67.0 52 59.6
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 4.9e-08 63.5 386 23.1
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 4.9e-08 63.5 415 23.4
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 4.5e-06 57.0 36 75.0


User provided reference genes

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