Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 3.2e-43 178.3 113 100.0
RcHm_v2.0_Chr4g0427811 Rosa chinensis HOM05D008705 ORTHO05D000669 3.2e-43 178.3 113 100.0
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 3.2e-43 178.3 113 100.0
RcHm_v2.0_Chr2g0157121 Rosa chinensis HOM05D008705 ORTHO05D000669 9.4e-43 176.8 113 99.1
RcHm_v2.0_Chr3g0476051 Rosa chinensis HOM05D008705 ORTHO05D000669 9.4e-43 176.8 113 94.7
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 2.7e-42 175.3 113 80.5
RcHm_v2.0_Chr5g0025231 Rosa chinensis HOM05D008705 ORTHO05D000669 2.7e-42 175.3 113 98.2
RcHm_v2.0_Chr1g0345641 Rosa chinensis HOM05D008705 ORTHO05D000669 1.8e-33 146.0 97 84.5
RcHm_v2.0_Chr5g0001961 Rosa chinensis HOM05D008705 ORTHO05D000669 1.8e-25 119.4 64 89.1
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 3.0e-25 118.6 113 73.5
RcHm_v2.0_Chr4g0410891 Rosa chinensis HOM05D008705 ORTHO05D000669 3.0e-25 118.6 113 73.5
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 2.2e-23 112.5 63 82.5
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.2e-23 112.5 63 82.5
FAN15G2736 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.2e-23 112.5 63 82.5
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.9e-23 112.1 64 81.2
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 6.4e-23 110.9 63 81.0
RcHm_v2.0_Chr2g0148471 Rosa chinensis HOM05D008705 ORTHO05D000669 1.4e-22 109.8 64 79.7
RcHm_v2.0_Chr5g0009841 Rosa chinensis HOM05D008705 ORTHO05D000669 6.8e-17 90.9 97 70.1
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.4e-14 83.2 42 88.1
RcHm_v2.0_Chr7g0199391 Rosa chinensis HOM05D008705 ORTHO05D000669 1.2e-08 63.5 58 63.8
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 1.4e-06 56.6 65 36.9


User provided reference genes

Program Settings