Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0417571 Rosa chinensis HOM05D009145 ORTHO05D000140 1.6e-75 286.2 163 100.0
RcHm_v2.0_Chr5g0053961 Rosa chinensis HOM05D009145 ORTHO05D000140 6.3e-72 274.2 161 88.8
RcHm_v2.0_Chr7g0231381 Rosa chinensis HOM05D000665 ORTHO05D000140 2.0e-65 252.7 159 84.9
RcHm_v2.0_Chr4g0405761 Rosa chinensis HOM05D000665 ORTHO05D000140 1.3e-48 196.8 132 81.1
MD07G1064000 Malus domestica HOM05D009249 ORTHO05D002074 1.4e-23 113.6 103 57.3
FvH4_6g32032 Fragaria vesca HOM05D000665 ORTHO05D000140 3.9e-21 105.5 91 60.4
FAN14G0837 Fragaria x ananassa HOM05D009145 ORTHO05D000140 3.9e-21 105.5 91 60.4
Migut.E01617 Erythranthe guttata HOM05D009145 ORTHO05D000140 3.1e-18 95.9 159 37.1
COL.COLO4_20623 Corchorus olitorius HOM05D009145 ORTHO05D000140 8.3e-16 87.8 156 36.5
FAN09G3992 Fragaria x ananassa HOM05D000665 ORTHO05D000140 1.4e-15 87.0 81 55.6
COL.COLO4_38347 Corchorus olitorius HOM05D009145 ORTHO05D000140 2.5e-12 76.3 114 39.5
COL.COLO4_34387 Corchorus olitorius HOM05D009145 ORTHO05D000140 4.3e-12 75.5 88 43.2
EL10As1g23106 Beta vulgaris HOM05D000034 ORTHO05D000037 1.4e-10 70.5 154 29.2
EL10Ac4g08803 Beta vulgaris HOM05D009145 ORTHO05D000140 1.8e-10 70.1 149 32.9
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-10 70.1 138 35.5
EL10Ac1g02133 Beta vulgaris HOM05D009145 ORTHO05D000140 2.3e-10 69.7 149 32.9
SGA_v2.0_scaffold134G34689 Striga asiatica HOM05D009145 ORTHO05D000140 3.1e-10 69.3 97 41.2
EL10Ac6g14168 Beta vulgaris HOM05D009145 ORTHO05D000140 4.0e-10 68.9 154 27.9
EL10Ac9g20779 Beta vulgaris HOM05D009145 ORTHO05D000140 5.2e-10 68.6 149 32.2
AUR62025826 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.8e-10 68.2 148 31.8
AUR62031358 Chenopodium quinoa HOM05D009145 ORTHO05D000140 2.0e-09 66.6 148 31.8
EL10Ac4g08060 Beta vulgaris HOM05D009145 ORTHO05D000140 4.4e-09 65.5 148 29.7
AUR62015057 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.8e-09 65.1 144 32.6
AUR62028861 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.8e-09 64.3 110 33.6
AUR62024279 Chenopodium quinoa HOM05D009145 ORTHO05D000140 1.7e-08 63.5 144 31.2
SGA_v2.0_scaffold17G08136 Striga asiatica HOM05D009145 ORTHO05D000140 3.7e-08 62.4 152 31.6
EL10Ac8g18839 Beta vulgaris HOM05D002420 ORTHO05D002422 4.9e-08 62.0 149 28.9
AUR62034505 Chenopodium quinoa HOM05D009145 ORTHO05D000140 8.3e-08 61.2 82 36.6
EL10Ac6g14410 Beta vulgaris HOM05D009145 ORTHO05D000140 1.4e-07 60.5 88 36.4
AUR62033616 Chenopodium quinoa HOM05D009145 ORTHO05D000140 9.2e-07 57.8 153 28.8
COL.COLO4_23750 Corchorus olitorius HOM05D009145 ORTHO05D029124 9.2e-07 57.8 123 32.5
AUR62038998 Chenopodium quinoa HOM05D009145 ORTHO05D000140 1.2e-06 57.4 144 29.9


User provided reference genes

Program Settings