Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0417091 Rosa chinensis HOM05D013926 ORTHO05D344408 1.3e-177 626.3 320 100.0
RcHm_v2.0_Chr2g0116941 Rosa chinensis HOM05D021305 ORTHO05D010102 1.4e-30 137.9 169 47.9
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 9.9e-21 105.1 320 31.9
RcHm_v2.0_Chr5g0046641 Rosa chinensis HOM05D021305 ORTHO05D344348 4.9e-20 102.8 94 59.6
RcHm_v2.0_Chr7g0195521 Rosa chinensis HOM05D013926 ORTHO05D020985 3.6e-15 86.7 176 38.1
RcHm_v2.0_Chr2g0175631 Rosa chinensis HOM05D013926 ORTHO05D020985 6.2e-15 85.9 176 37.5
RcHm_v2.0_Chr4g0388241 Rosa chinensis HOM05D013926 ORTHO05D020985 2.4e-14 84.0 176 37.5
RcHm_v2.0_Chr5g0068051 Rosa chinensis HOM05D000642 ORTHO05D000483 9.0e-14 82.0 58 72.4
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 3.4e-13 80.1 185 35.7
RcHm_v2.0_Chr4g0439061 Rosa chinensis HOM05D021305 ORTHO05D347464 1.2e-10 71.6 178 33.7
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 4.6e-10 69.7 47 70.2
RcHm_v2.0_Chr4g0394391 Rosa chinensis HOM05D018137 ORTHO05D347677 1.3e-09 68.2 345 30.1
RcHm_v2.0_Chr7g0185391 Rosa chinensis HOM05D013926 ORTHO05D020985 1.3e-09 68.2 119 40.3
FAN03G3436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.7e-09 65.5 263 30.8
RcHm_v2.0_Chr1g0363721 Rosa chinensis HOM05D018137 ORTHO05D343934 3.3e-08 63.5 334 29.6
FAN11G1312 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.3e-08 63.2 257 30.4
FAN09G3528 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.6e-08 62.0 154 33.8
RcHm_v2.0_Chr3g0468731 Rosa chinensis HOM05D008097 ORTHO05D010102 9.6e-08 62.0 49 57.1
FAN05G2015 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-07 61.6 182 31.3
FAN02G0790 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-07 61.2 252 30.6
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 1.6e-07 61.2 107 35.5
FvH4_6g18410 Fragaria vesca HOM05D006059 ORTHO05D010613 2.1e-07 60.8 154 33.8
FAN14G0698 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.1e-07 60.8 154 33.1
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 2.8e-07 60.5 159 33.3
FvH4_3g21341 Fragaria vesca HOM05D008097 ORTHO05D010102 3.6e-07 60.1 49 63.3
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 3.6e-07 60.1 218 31.2
FAN16G0265 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.6e-07 60.1 257 30.0
FAN16G0608 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.6e-07 60.1 49 63.3
FAN24G1586 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.6e-07 60.1 49 63.3
FAN25G2016 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.6e-07 60.1 49 63.3
FAN25G3685 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.6e-07 60.1 49 63.3
FvH4_4g31671 Fragaria vesca HOM05D008097 ORTHO05D010102 4.8e-07 59.7 48 64.6
FAN13G2239 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.8e-07 59.7 252 29.8
RcHm_v2.0_Chr2g0135791 Rosa chinensis HOM05D013926 ORTHO05D020985 4.8e-07 59.7 51 58.8
FAN03G2020 Fragaria x ananassa HOM05D008097 ORTHO05D010102 6.2e-07 59.3 49 61.2
FAN25G1404 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.1e-07 58.9 62 51.6
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 1.4e-06 58.2 154 33.8
FAN03G2752 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-06 57.8 258 29.8
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 1.8e-06 57.8 110 34.5
RcHm_v2.0_Chr5g0032611 Rosa chinensis HOM05D021305 ORTHO05D341457 2.4e-06 57.4 53 60.4
FvH4_5g18320 Fragaria vesca HOM05D006059 ORTHO05D010613 3.1e-06 57.0 150 33.3
FAN06G3421 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.1e-06 57.0 150 33.3
FAN06G4807 Fragaria x ananassa HOM05D008097 ORTHO05D010102 4.0e-06 56.6 49 51.0
FAN18G2462 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.9e-06 55.8 156 33.3
FAN14G1746 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.0e-06 55.5 102 38.2


User provided reference genes

Program Settings