Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.2e-146 522.3 271 100.0
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 1.1e-121 440.3 266 86.1
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.2e-121 438.7 267 85.0
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.2e-121 438.3 266 85.7
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.5e-99 366.7 249 79.5
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 3.2e-81 305.8 250 68.0
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 6.7e-79 298.1 248 66.9
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 6.3e-77 291.6 244 68.4
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.1e-76 290.8 242 64.5
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.0e-75 286.6 234 65.8
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 3.0e-71 272.7 221 64.7
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 6.7e-71 271.6 231 61.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 5.7e-70 268.5 232 61.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 3.7e-69 265.8 228 61.4
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 4.5e-67 258.8 223 61.9
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 2.2e-66 256.5 227 62.6
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 2.9e-66 256.1 238 59.7
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 3.8e-66 255.8 232 58.2
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.5e-65 253.1 232 58.2
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 4.2e-65 252.3 229 59.8
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.3e-63 246.5 234 57.7
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.2e-62 244.2 233 58.4
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.2e-62 244.2 231 54.5
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 2.0e-62 243.4 233 57.1
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 5.7e-62 241.9 224 58.9
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 7.5e-62 241.5 221 59.7
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.3e-61 240.7 233 56.7
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 6.3e-61 238.4 224 58.5
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 7.7e-59 231.5 234 53.4
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 5.0e-58 228.8 217 56.7
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 6.6e-58 228.4 255 52.2
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 2.5e-57 226.5 232 55.2
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 2.1e-56 223.4 231 49.4
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.4e-55 220.7 221 54.3
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 8.9e-55 218.0 186 59.1
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.0e-54 216.9 188 58.0
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 3.7e-53 212.6 231 48.9
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 4.9e-53 212.2 218 53.7
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 9.2e-52 208.0 221 50.7
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 9.2e-52 208.0 221 50.7
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 7.8e-51 204.9 189 56.1
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.0e-50 204.5 221 50.7
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.7e-50 203.8 222 52.7
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 3.8e-50 202.6 224 50.9
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 3.8e-50 202.6 224 50.9
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 3.3e-49 199.5 224 50.4
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 4.3e-49 199.1 224 49.6
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 5.6e-49 198.7 224 49.6
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 9.5e-49 198.0 221 48.9
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 2.8e-48 196.4 239 47.3
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 3.6e-48 196.1 144 68.8
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 6.1e-48 195.3 221 48.0
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 8.0e-48 194.9 209 50.2
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 8.9e-47 191.4 221 48.4
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 2.6e-46 189.9 220 48.6
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.9e-45 186.4 226 46.5
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 8.0e-40 168.3 166 55.4
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 5.2e-39 165.6 174 48.9
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 8.9e-39 164.9 167 55.7
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.2e-38 164.5 176 49.4
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.6e-34 148.7 198 40.4
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 2.5e-33 146.7 116 65.5
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 4.9e-29 132.5 164 47.6
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 4.9e-29 132.5 239 35.1
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.7e-26 124.0 205 35.6
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.4e-23 114.4 132 50.8
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 3.1e-23 113.2 103 57.3
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 4.9e-21 105.9 100 55.0
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.9e-20 104.0 189 33.3
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 4.2e-20 102.8 160 36.2
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.0e-18 98.2 209 31.1
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.7e-18 97.4 206 31.1
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.5e-17 94.4 183 33.9
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 9.6e-17 91.7 64 75.0
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.1e-15 88.2 113 42.5
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 4.9e-13 79.3 116 37.9
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.4e-12 77.8 68 58.8
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.7e-10 70.9 118 35.6
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 3.9e-10 69.7 52 69.2


User provided reference genes

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