Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.0e-121 440.3 249 100.0
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 4.1e-115 418.3 249 88.4
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.2e-114 416.8 245 86.9
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.9e-113 412.1 245 86.5
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.6e-109 399.1 245 83.3
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.1e-107 392.1 245 79.6
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 4.5e-106 388.3 243 79.8
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 3.8e-105 385.2 245 78.8
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 5.0e-105 384.8 245 78.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 8.6e-105 384.0 243 80.7
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.5e-104 383.3 243 79.8
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.5e-104 383.3 245 78.0
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.9e-104 382.9 245 78.4
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 7.3e-104 380.9 245 76.7
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.2e-103 380.2 246 76.8
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.2e-103 380.2 245 76.7
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.2e-103 380.2 247 78.9
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.6e-103 379.8 247 76.9
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.1e-103 379.4 243 77.4
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.6e-103 378.6 245 76.7
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 6.1e-103 377.9 247 75.7
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 8.0e-103 377.5 245 77.1
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.0e-102 377.1 245 78.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.8e-102 376.3 245 75.5
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.0e-102 375.6 243 76.1
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 4.0e-102 375.2 246 74.8
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 5.2e-102 374.8 240 79.2
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 6.8e-102 374.4 247 80.2
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 6.8e-102 374.4 247 75.7
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 8.9e-102 374.0 245 75.1
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.2e-101 373.6 245 75.9
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.2e-101 373.6 245 75.9
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.5e-101 373.2 246 76.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 2.0e-101 372.9 248 75.8
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 2.0e-101 372.9 248 81.5
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.5e-101 370.9 242 76.0
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.3e-100 370.2 245 75.1
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.3e-100 370.2 245 75.1
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.3e-100 370.2 245 75.1
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.3e-100 370.2 245 75.1
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.3e-100 370.2 246 74.4
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.7e-100 369.8 245 74.7
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.7e-100 369.8 252 75.4
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.2e-100 369.4 245 78.0
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.2e-100 369.4 242 76.0
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.2e-100 369.4 246 75.6
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 2.9e-100 369.0 244 75.0
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 2.9e-100 369.0 244 75.0
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 2.9e-100 369.0 245 74.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 3.7e-100 368.6 245 74.7
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 3.7e-100 368.6 245 75.9
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 3.7e-100 368.6 245 75.9
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 4.9e-100 368.2 248 74.6
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.3e-100 367.5 247 74.5
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.8e-99 366.3 245 74.7
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.8e-99 366.3 245 75.5
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 5.4e-99 364.8 249 73.5
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 5.4e-99 364.8 245 75.5
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 5.4e-99 364.8 245 74.7
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 7.0e-99 364.4 245 73.1
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.6e-98 363.2 245 74.7
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 4.6e-98 361.7 245 73.9
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 7.8e-98 360.9 245 73.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 7.8e-98 360.9 257 71.6
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.0e-97 360.5 245 73.9
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.3e-97 360.1 245 74.7
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.0e-97 359.0 245 72.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.1e-94 350.5 245 72.2
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.4e-94 350.1 264 69.3
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.3e-94 349.4 245 71.0
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.6e-93 345.9 245 69.8
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.7e-92 343.2 243 69.5
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 6.4e-92 341.3 245 69.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.9e-91 339.7 240 68.8
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 5.4e-91 338.2 245 73.9
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 5.4e-91 338.2 245 71.0
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.3e-89 332.8 234 72.2
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 5.6e-88 328.2 245 69.8
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.6e-87 326.6 247 73.7
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 4.4e-85 318.5 245 66.5
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 4.4e-85 318.5 245 67.8
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.7e-84 316.6 242 65.7
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.7e-84 315.5 203 81.8
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.9e-83 313.2 203 78.3
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 7.1e-83 311.2 202 86.6
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.2e-82 310.5 245 63.7
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.6e-82 310.1 245 64.5
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.1e-82 309.7 245 64.5
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.5e-80 303.5 227 69.6
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 9.5e-80 300.8 203 73.4
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.2e-79 300.4 213 75.1
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.8e-79 299.3 245 63.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.1e-78 297.4 182 76.4
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 3.1e-78 295.8 258 65.1
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 6.8e-78 294.7 180 76.7
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.4e-75 286.2 242 61.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 7.1e-75 284.6 245 62.9
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 2.1e-74 283.1 184 80.4
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.3e-64 249.2 156 75.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 8.1e-63 244.6 244 50.8
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 2.4e-59 233.0 246 47.6
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.3e-57 227.3 238 49.6
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 3.0e-57 226.1 202 67.8
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.1e-55 218.0 246 45.5
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-53 213.8 242 43.0
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 3.5e-50 202.6 152 63.2
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 8.7e-49 198.0 120 82.5
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 2.5e-48 196.4 150 66.0
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 9.6e-48 194.5 110 86.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 9.6e-48 194.5 150 66.0
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 9.6e-48 194.5 150 66.0
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.1e-47 193.4 116 77.6
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 7.2e-35 151.8 93 77.4
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 6.7e-33 145.2 92 76.1
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.9e-32 143.7 91 73.6
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 9.1e-30 134.8 231 37.2
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 5.0e-28 129.0 119 58.8
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.0e-17 94.7 166 42.8
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.8e-17 94.0 71 63.4
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 6.7e-09 65.5 39 71.8
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 9.7e-08 61.6 38 84.2


User provided reference genes

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