Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 5.1e-76 287.7 151 100.0
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-71 273.1 151 96.0
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-71 273.1 151 96.0
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.2e-70 268.5 151 94.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.4e-70 267.7 151 94.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 2.3e-68 262.3 145 95.2
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 3.8e-55 218.4 153 78.4
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.0e-48 196.1 152 74.3
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.2e-46 188.7 153 71.2
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 3.7e-42 175.3 151 66.9
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 4.8e-42 174.9 151 66.9
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 4.8e-42 174.9 151 67.5
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 6.3e-42 174.5 151 66.9
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 6.3e-42 174.5 158 64.6
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.4e-41 173.3 152 65.8
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.8e-41 172.9 155 65.2
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 3.1e-41 172.2 152 65.1
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.2e-40 170.2 152 67.8
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.5e-40 169.9 153 66.0
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 7.6e-40 167.5 152 65.8
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 7.6e-40 167.5 154 66.2
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 2.9e-39 165.6 155 63.2
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 5.0e-39 164.9 154 65.6
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 8.5e-39 164.1 155 62.6
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 8.5e-39 164.1 155 62.6
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.1e-38 163.7 151 63.6
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.4e-38 163.3 147 66.7
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.9e-38 162.9 151 63.6
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 5.5e-38 161.4 150 63.3
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 9.3e-38 160.6 153 64.7
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.6e-37 159.8 149 67.1
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 2.1e-37 159.5 151 63.6
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.7e-37 159.1 149 67.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.7e-37 159.1 152 63.8
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.7e-37 159.1 149 62.4
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.6e-37 158.7 153 64.1
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 3.6e-37 158.7 150 62.7
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.6e-37 158.7 138 65.9
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 4.6e-37 158.3 132 68.2
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 4.6e-37 158.3 159 61.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.0e-36 157.1 149 65.1
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.3e-36 156.8 150 62.0
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.3e-36 156.0 132 67.4
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 3.0e-36 155.6 145 66.9
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 3.0e-36 155.6 150 66.0
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.9e-36 155.2 152 59.2
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 8.7e-36 154.1 147 62.6
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 8.7e-36 154.1 147 62.6
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.1e-35 153.7 151 61.6
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 1.5e-35 153.3 147 62.6
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.9e-35 152.9 151 62.3
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.9e-35 152.9 151 62.3
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.3e-35 152.1 150 60.0
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 3.3e-35 152.1 126 71.4
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.2e-34 149.4 148 62.8
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.2e-34 149.4 132 65.9
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 2.2e-34 149.4 152 59.9
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 2.8e-34 149.1 160 59.4
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 3.7e-34 148.7 109 73.4
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 6.3e-34 147.9 147 61.2
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.1e-33 147.1 150 59.3
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.8e-33 146.4 148 59.5
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 5.3e-33 144.8 149 59.7
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.2e-32 143.7 153 60.1
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.2e-32 143.7 109 70.6
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 2.0e-32 142.9 148 58.1
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.4e-32 142.1 151 58.3
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 3.4e-32 142.1 150 60.7
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 5.9e-32 141.4 109 68.8
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 5.9e-32 141.4 116 68.1
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 7.7e-32 141.0 151 58.3
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.3e-31 140.2 151 57.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.3e-31 140.2 148 60.8
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 1.7e-31 139.8 148 60.1
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 2.5e-30 136.0 154 58.4
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.2e-30 135.2 156 57.1
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 7.2e-30 134.4 153 54.9
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.6e-29 133.3 152 55.3
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.6e-29 133.3 153 54.2
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.1e-29 132.9 149 57.0
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.1e-29 132.9 153 54.2
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.7e-29 132.5 153 54.9
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 2.7e-29 132.5 153 53.6
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 2.7e-29 132.5 150 58.0
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 3.6e-29 132.1 112 67.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 6.1e-29 131.3 138 58.7
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.0e-28 130.6 156 54.5
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.4e-28 130.2 151 57.0
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 3.0e-28 129.0 113 68.1
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 5.1e-28 128.3 155 53.5
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 5.1e-28 128.3 123 62.6
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.5e-27 126.7 147 55.1
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.5e-27 126.7 131 61.8
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.0e-27 126.3 155 56.1
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 2.6e-27 125.9 150 53.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 4.4e-27 125.2 117 64.1
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.3e-26 123.6 150 55.3
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.2e-26 122.9 150 56.0
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 4.8e-26 121.7 131 59.5
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 4.8e-26 121.7 92 73.9
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.4e-25 120.2 147 53.7
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.4e-25 119.4 140 55.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.1e-25 119.0 159 52.2
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.1e-25 118.6 70 90.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 6.9e-25 117.9 124 55.6
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 9.1e-25 117.5 107 66.4
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.2e-24 117.1 70 88.6
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.0e-23 114.0 78 78.2
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 7.2e-22 107.8 144 50.7
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.0e-19 99.8 108 61.1
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 3.7e-18 95.5 182 39.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 4.8e-18 95.1 124 54.0
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 8.2e-18 94.4 67 73.1
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.1e-17 92.4 118 50.8
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 4.1e-17 92.0 86 62.8
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 5.3e-17 91.7 73 68.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 1.2e-16 90.5 113 49.6
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.8e-15 85.5 108 50.9
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 5.0e-15 85.1 122 45.1
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.0e-11 73.2 91 54.9
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.1e-09 65.9 62 58.1
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.2e-08 63.9 97 47.4
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 1.6e-08 63.5 88 43.2
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.5e-06 56.2 91 44.0
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 3.2e-06 55.8 61 47.5


User provided reference genes

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