Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.6e-61 239.2 120 100.0
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 7.9e-48 193.7 120 84.2
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.3e-47 192.2 120 84.2
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.0e-43 179.1 120 80.8
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 2.9e-42 175.3 121 76.0
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.4e-36 155.6 127 66.9
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.0e-34 150.2 118 65.3
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 6.5e-34 147.5 118 67.8
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.9e-33 146.0 118 63.6
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 9.4e-33 143.7 123 66.7
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.4e-31 139.8 118 61.0
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 5.2e-31 137.9 119 61.3
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.5e-30 136.3 105 66.7
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 1.5e-30 136.3 119 59.7
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 2.6e-30 135.6 103 66.0
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 5.7e-30 134.4 122 58.2
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 7.4e-30 134.0 111 63.1
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 7.4e-30 134.0 98 66.3
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-29 133.3 118 58.5
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 1.3e-29 133.3 108 65.7
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 2.8e-29 132.1 124 58.9
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 3.7e-29 131.7 123 61.8
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 6.3e-29 131.0 112 64.3
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 8.2e-29 130.6 108 61.1
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.4e-28 129.8 125 57.6
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 1.4e-28 129.8 118 60.2
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-28 129.0 103 63.1
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 3.1e-28 128.6 118 59.3
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 4.5e-27 124.8 108 64.8
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 1.7e-26 122.9 123 56.1
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 3.8e-26 121.7 91 70.3
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 5.0e-26 121.3 121 55.4
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 5.0e-26 121.3 107 57.9
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.1e-25 120.2 104 59.6
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.5e-25 119.8 120 54.2
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.9e-25 119.4 90 68.9
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 3.2e-25 118.6 104 60.6
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 7.2e-25 117.5 100 62.0
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 7.2e-25 117.5 100 62.0
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 7.2e-25 117.5 89 67.4
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 7.2e-25 117.5 103 59.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 9.4e-25 117.1 105 58.1
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 2.7e-24 115.5 100 62.0
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 2.7e-24 115.5 116 56.0
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 3.6e-24 115.2 100 61.0
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 4.7e-24 114.8 100 60.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 4.7e-24 114.8 100 60.0
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 1.0e-23 113.6 120 51.7
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 1.0e-23 113.6 88 67.0
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 1.8e-23 112.8 122 48.4
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 3.0e-23 112.1 101 57.4
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 4.0e-23 111.7 103 51.5
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 8.8e-23 110.5 117 55.6
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.5e-22 109.8 117 49.6
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 2.0e-22 109.4 123 55.3
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 2.0e-22 109.4 97 56.7
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 2.6e-22 109.0 98 58.2
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 2.6e-22 109.0 109 58.7
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 3.3e-22 108.6 93 59.1
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 4.4e-22 108.2 93 59.1
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 5.7e-22 107.8 95 61.1
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 5.7e-22 107.8 93 60.2
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 5.7e-22 107.8 116 51.7
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 9.7e-22 107.1 89 61.8
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.7e-21 106.3 116 51.7
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 4.8e-21 104.8 93 59.1
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 8.3e-21 104.0 87 64.4
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 1.8e-20 102.8 105 52.4
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 1.8e-20 102.8 109 53.2
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 2.4e-20 102.4 68 73.5
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 2.4e-20 102.4 101 56.4
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 3.1e-20 102.1 118 48.3
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 3.1e-20 102.1 118 48.3
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 4.1e-20 101.7 110 58.2
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 2.0e-19 99.4 110 48.2
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 3.5e-19 98.6 156 43.6
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 5.9e-19 97.8 95 50.5
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 1.0e-18 97.1 116 45.7
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 2.9e-18 95.5 88 53.4
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 5.0e-18 94.7 110 44.5
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.1e-17 93.6 67 64.2
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 1.9e-17 92.8 110 45.5
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 2.5e-17 92.4 120 44.2
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 2.5e-17 92.4 106 47.2
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 5.5e-17 91.3 84 56.0
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 2.1e-16 89.4 62 67.7
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 2.1e-16 89.4 100 47.0
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 4.7e-16 88.2 58 70.7
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 4.0e-15 85.1 71 62.0
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 5.2e-15 84.7 55 76.4
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 4.8e-13 78.2 62 59.7
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 2.4e-12 75.9 65 53.8
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 5.5e-09 64.7 81 42.0
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 1.2e-08 63.5 56 48.2
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 2.1e-08 62.8 95 36.8
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.6e-08 62.0 78 48.7
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.6e-08 62.0 78 47.4
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 8.0e-08 60.8 84 45.2
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 1.0e-07 60.5 67 44.8
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.4e-07 60.1 78 47.4
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.0e-07 58.5 78 47.4
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.2e-07 58.2 78 46.2
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.2e-06 57.0 78 44.9
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.0e-06 56.2 71 46.5


User provided reference genes

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