Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0404671 Rosa chinensis HOM05D004851 ORTHO05D006091 1.2e-36 156.0 76 100.0
RcHm_v2.0_Chr3g0482801 Rosa chinensis HOM05D004851 ORTHO05D006091 1.1e-13 79.7 44 88.6
Prupe.2G329900 Prunus persica HOM05D004851 ORTHO05D006091 1.8e-13 79.0 60 65.0
RcHm_v2.0_Chr1g0384661 Rosa chinensis HOM05D004851 ORTHO05D006091 2.4e-13 78.6 58 69.0
FvH4_7g34290 Fragaria vesca HOM05D004851 ORTHO05D006091 8.9e-13 76.6 44 81.8
FAN01G0391 Fragaria x ananassa HOM05D004851 ORTHO05D006091 8.9e-13 76.6 44 81.8
FAN10G2942 Fragaria x ananassa HOM05D004851 ORTHO05D006091 8.9e-13 76.6 44 81.8
FAN03G1643 Fragaria x ananassa HOM05D004851 ORTHO05D006091 1.2e-12 76.3 44 81.8
MD06G1015700 Malus domestica HOM05D004851 ORTHO05D006091 2.6e-12 75.1 46 76.1
MD14G1141700 Malus domestica HOM05D004851 ORTHO05D006091 2.6e-12 75.1 46 76.1
MD07G1311200 Malus domestica HOM05D004851 ORTHO05D006091 1.3e-11 72.8 46 73.9
ClCG02G007790 Citrullus lanatus HOM05D004851 ORTHO05D006091 3.2e-10 68.2 53 60.4
TAR628G1149 Trochodendron aralioides HOM05D004851 ORTHO05D006091 5.4e-10 67.4 58 62.1
Haze_00351 Corylus avellana HOM05D004851 ORTHO05D006091 7.1e-10 67.0 70 55.7
Nn4g24557 Nelumbo nucifera HOM05D004851 ORTHO05D006091 7.1e-10 67.0 53 64.2
Cfa016106 Carpinus fangiana HOM05D004851 ORTHO05D006091 1.2e-09 66.2 69 56.5
MBI10_g03402_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.6e-09 65.9 44 65.9
CiPaw.06G036900 Carya illinoinensis HOM05D004851 ORTHO05D006091 2.7e-09 65.1 53 60.4
CAN.G691.8 Capsicum annuum HOM05D004851 ORTHO05D006091 6.0e-09 63.9 43 72.1
Duzib106G1281 Durio zibethinus HOM05D004851 ORTHO05D006091 6.0e-09 63.9 62 54.8
MBI07_g19429_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 6.0e-09 63.9 44 63.6
Hma1.2p1_2196F.1_g316850 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 1.3e-08 62.8 54 59.3
Hma1.2p1_2196F.1_g316860 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 1.3e-08 62.8 54 59.3
Ciclev10031158m.g Citrus clementina HOM05D004851 ORTHO05D006091 1.7e-08 62.4 46 65.2
MELO3C024747.2 Cucumis melo HOM05D004851 ORTHO05D006091 1.7e-08 62.4 53 58.5
CANSAT01G3202 Cannabis sativa HOM05D004851 ORTHO05D006091 2.3e-08 62.0 58 56.9
Dinv29371 Davidia involucrata HOM05D004851 ORTHO05D006091 2.3e-08 62.0 58 56.9
Hma1.2p1_3283F.1_g334850 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 2.3e-08 62.0 54 59.3
Zm00001eb229290 Zea mays HOM05D004851 ORTHO05D006091 2.3e-08 62.0 43 65.1
Nitab4.5_0005243g0030 Nicotiana tabacum HOM05D004851 ORTHO05D006091 3.9e-08 61.2 52 59.6
Os02g0102400 Oryza sativa ssp. japonica HOM05D004851 ORTHO05D006091 3.9e-08 61.2 43 62.8
Solyc11g008710.2 Solanum lycopersicum HOM05D004851 ORTHO05D006091 3.9e-08 61.2 43 67.4
Sopen11g004490 Solanum pennellii HOM05D004851 ORTHO05D006091 3.9e-08 61.2 43 67.4
PGSC0003DMG402016246 Solanum tuberosum HOM05D004851 ORTHO05D006091 3.9e-08 61.2 43 67.4
CsaV3_2G035950 Cucumis sativus L. HOM05D004851 ORTHO05D006091 8.7e-08 60.1 53 56.6
vmacro07474 Vaccinium macrocarpon HOM05D004851 ORTHO05D006091 1.1e-07 59.7 54 57.4
TWI60G1536 Tripterygium wilfordii HOM05D004851 ORTHO05D006091 1.5e-07 59.3 58 51.7
Sed0012488 Sechium edule HOM05D004851 ORTHO05D006091 2.5e-07 58.5 53 54.7
CSS0035891 Camellia sinensis var. sinensis HOM05D004851 ORTHO05D006091 3.3e-07 58.2 68 52.9
DCAR_008779 Daucus carota HOM05D004851 ORTHO05D006091 3.3e-07 58.2 47 53.2
Actinidia08788 Actinidia chinensis HOM05D004851 ORTHO05D006091 4.3e-07 57.8 53 56.6
Cpa.g.sc34.168 Carica papaya HOM05D004851 ORTHO05D006091 4.3e-07 57.8 58 48.3
Actinidia20814 Actinidia chinensis HOM05D004851 ORTHO05D006091 5.6e-07 57.4 53 54.7
Sc17g0001530 Simmondsia chinensis HOM05D004851 ORTHO05D006091 2.1e-06 55.5 55 54.5
arahy.Tifrunner.gnm1.ann1.NF9HU2 Arachis hypogaea HOM05D004851 ORTHO05D006091 3.6e-06 54.7 54 46.3
arahy.Tifrunner.gnm1.ann1.VYGS4N Arachis hypogaea HOM05D004851 ORTHO05D006091 3.6e-06 54.7 54 46.3
Lalb_Chr01g0022101 Lupinus albus HOM05D004851 ORTHO05D006091 4.7e-06 54.3 53 49.1
PGR031G1011 Punica granatum HOM05D004851 ORTHO05D006091 4.7e-06 54.3 53 47.2


User provided reference genes

Program Settings