Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 4.5e-222 774.2 384 100.0
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.5e-196 689.5 373 91.7
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.7e-195 684.5 373 90.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.8e-170 602.8 373 83.4
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.8e-168 595.1 372 79.3
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 8.7e-165 583.9 372 76.9
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 3.0e-149 532.3 366 71.0
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.0e-141 507.3 364 67.0
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.4e-141 506.9 370 68.6
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.8e-141 506.5 366 67.8
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 3.9e-141 505.4 369 68.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 6.7e-141 504.6 369 67.2
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.0e-140 503.1 362 68.5
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.3e-139 500.4 352 69.3
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 4.8e-139 498.4 368 66.0
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.1e-138 494.2 368 66.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.7e-136 490.0 377 65.0
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.7e-136 490.0 384 64.6
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 8.5e-136 487.6 368 66.0
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 9.4e-135 484.2 378 64.8
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 3.6e-134 482.3 379 64.6
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 4.7e-134 481.9 368 64.7
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.4e-133 480.3 370 63.5
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.8e-133 479.9 365 66.8
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.8e-133 479.9 377 62.9
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 8.8e-133 477.6 378 64.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 7.4e-132 474.6 368 64.7
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.3e-131 473.8 371 65.5
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.7e-131 472.2 371 62.3
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 6.3e-131 471.5 369 64.5
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 1.1e-130 470.7 371 62.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.4e-130 469.5 372 63.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.4e-130 469.5 368 65.8
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 7.0e-130 468.0 369 63.4
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 7.0e-130 468.0 357 64.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.2e-129 467.2 350 67.1
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.3e-128 463.8 352 63.9
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 6.5e-128 461.5 392 59.2
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 6.5e-128 461.5 347 66.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 1.1e-127 460.7 351 66.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.2e-127 459.1 383 60.8
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.6e-126 456.8 348 67.0
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.4e-125 453.8 352 63.1
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.3e-125 453.0 372 60.5
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.3e-125 453.0 370 62.2
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.0e-124 449.9 286 74.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.8e-122 443.4 350 65.4
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.6e-121 440.3 373 60.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.0e-121 439.9 359 62.1
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 6.5e-120 434.9 364 59.6
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 9.4e-119 431.0 372 61.0
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.2e-118 430.6 356 61.5
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.7e-118 429.5 227 92.5
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 3.6e-118 429.1 359 58.8
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.2e-117 425.2 360 62.2
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 8.8e-117 424.5 423 54.8
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.2e-116 424.1 296 69.3
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.2e-116 424.1 359 58.5
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.7e-116 421.8 349 63.3
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 9.8e-116 421.0 353 62.0
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.8e-115 419.5 380 57.4
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.1e-114 417.5 358 59.2
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 2.4e-114 416.4 351 60.7
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 9.1e-114 414.5 366 58.2
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.2e-113 414.1 351 59.8
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.7e-113 412.9 351 59.8
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.0e-112 411.0 360 60.0
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.0e-112 411.0 343 61.2
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.8e-112 409.1 367 55.3
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 5.0e-112 408.7 373 57.6
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.2e-110 404.1 355 56.3
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 4.7e-110 402.1 361 58.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.0e-109 399.4 332 59.6
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.0e-109 399.4 355 56.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 4.0e-109 399.1 365 55.3
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 8.8e-109 397.9 287 66.6
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 5.7e-108 395.2 355 56.1
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.3e-107 394.0 369 56.4
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 8.3e-107 391.3 344 57.3
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.1e-106 391.0 355 53.8
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 2.4e-106 389.8 341 58.9
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 3.1e-106 389.4 355 56.3
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 4.1e-106 389.0 346 57.5
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 9.2e-106 387.9 344 56.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.2e-105 387.5 344 56.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 2.7e-105 386.3 330 60.0
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 4.5e-105 385.6 344 56.4
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 7.3e-103 378.3 245 75.1
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.8e-102 376.3 280 66.4
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.8e-101 373.6 355 53.5
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.3e-101 373.2 355 53.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-100 370.5 260 67.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.1e-95 354.4 313 58.1
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 4.3e-95 352.4 291 61.5
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 6.8e-93 345.1 282 60.3
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 7.8e-89 331.6 374 48.4
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.3e-88 330.1 229 68.1
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 3.9e-88 329.3 330 51.5
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.8e-85 318.5 252 63.1
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.1e-82 311.2 355 48.2
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 6.6e-80 302.0 335 46.6
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-77 293.9 179 73.2
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.5e-76 290.8 330 50.0
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.4e-76 289.7 302 49.7
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.3e-75 287.7 297 54.2
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.2e-73 281.2 172 73.3
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.8e-56 224.2 170 66.5
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.4e-53 214.5 306 40.2
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.6e-49 199.5 159 58.5
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 6.9e-45 185.7 242 43.0
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.7e-41 173.7 146 60.3
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.8e-40 171.0 267 39.3
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 6.9e-37 159.1 184 43.5
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.2e-34 149.8 202 43.6
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.6e-25 121.3 71 83.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 3.0e-16 90.5 104 44.2
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 7.7e-12 75.9 48 68.8
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.7e-11 74.7 55 60.0


User provided reference genes

Program Settings