Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0400531 Rosa chinensis HOM05D000010 ORTHO05D009917 8.3e-70 266.9 135 100.0
RcHm_v2.0_Chr6g0308271 Rosa chinensis HOM05D000010 ORTHO05D009917 1.2e-65 253.1 133 95.5
FAN24G2078 Fragaria x ananassa HOM05D000010 ORTHO05D009917 1.7e-51 206.1 133 82.0
FAN15G3281 Fragaria x ananassa HOM05D000010 ORTHO05D009917 3.9e-51 204.9 133 82.0
FAN20G2504 Fragaria x ananassa HOM05D000010 ORTHO05D009917 5.0e-51 204.5 133 81.2
FAN27G1412 Fragaria x ananassa HOM05D000010 ORTHO05D009917 6.6e-51 204.1 133 81.2
FvH4_2g34080 Fragaria vesca HOM05D000010 ORTHO05D009917 8.6e-51 203.8 133 81.2
MD15G1079400 Malus domestica HOM05D000010 ORTHO05D009917 1.0e-35 153.7 136 61.0
Prupe.1G432600 Prunus persica HOM05D000010 ORTHO05D009917 1.1e-34 150.2 136 60.3
MD08G1096700 Malus domestica HOM05D000010 ORTHO05D009917 6.2e-33 144.4 136 59.6
Dinv39288 Davidia involucrata HOM05D000010 ORTHO05D009917 1.3e-22 110.2 140 48.6
QL02p004367 Quercus lobata HOM05D000010 ORTHO05D009917 2.2e-22 109.4 141 44.0
CSS0029319 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D009917 1.4e-21 106.7 139 46.8
Sabra14G0017600 Salix brachista HOM05D000010 ORTHO05D009917 1.9e-21 106.3 141 48.2
Potri.014G025700 Populus trichocarpa HOM05D000010 ORTHO05D009917 4.2e-21 105.1 141 46.8
CiPaw.15G054400 Carya illinoinensis HOM05D000010 ORTHO05D009917 4.6e-20 101.7 139 43.2
Cfa018069 Carpinus fangiana HOM05D000010 ORTHO05D009917 5.6e-18 94.7 145 42.1
GSVIVG01009464001 Vitis vinifera HOM05D000010 ORTHO05D009917 5.6e-18 94.7 141 44.7
Thecc.08G003600 Theobroma cacao HOM05D000010 ORTHO05D009917 1.3e-17 93.6 133 47.4
TWI56G1408 Tripterygium wilfordii HOM05D000010 ORTHO05D009917 2.8e-17 92.4 146 44.5
Hma1.2p1_0360F.1_g135730 Hydrangea macrophylla HOM05D000010 ORTHO05D009917 6.2e-17 91.3 141 44.0
EL10As7g23756 Beta vulgaris HOM05D000010 ORTHO05D009917 4.0e-16 88.6 129 44.2
Gorai.009G214000 Gossypium raimondii HOM05D000010 ORTHO05D009917 2.0e-15 86.3 132 45.5
Hma1.2p1_1072F.1_g254200 Hydrangea macrophylla HOM05D000010 ORTHO05D009917 3.4e-15 85.5 139 42.4
Rhsim06G0052800 Rhododendron simsii HOM05D000010 ORTHO05D009917 1.3e-14 83.6 129 43.4
Actinidia01094 Actinidia chinensis HOM05D000010 ORTHO05D009917 2.2e-14 82.8 130 41.5
Actinidia22647 Actinidia chinensis HOM05D000428 ORTHO05D000582 2.2e-14 82.8 130 42.3
Peaxi162Scf00504g00008 Petunia axillaris HOM05D000010 ORTHO05D009917 2.9e-14 82.4 133 40.6
Nitab4.5_0006769g0030 Nicotiana tabacum HOM05D000010 ORTHO05D009917 4.9e-14 81.6 132 39.4
Gohir.D05G207400 Gossypium hirsutum HOM05D000010 ORTHO05D009917 1.4e-13 80.1 132 43.2
Sopen04g032270 Solanum pennellii HOM05D000010 ORTHO05D009917 1.4e-13 80.1 131 38.9
Ah.11g043010 Amaranthus hybridus HOM05D000010 ORTHO05D009917 2.4e-13 79.3 129 41.9
CAN.G1030.25 Capsicum annuum HOM05D000010 ORTHO05D009917 2.4e-13 79.3 130 38.5
Ah.05g167320 Amaranthus hybridus HOM05D000010 ORTHO05D009917 3.2e-13 79.0 139 38.1
Ciclev10003814m.g Citrus clementina HOM05D000010 ORTHO05D009917 3.2e-13 79.0 107 45.8
AUR62036626 Chenopodium quinoa HOM05D000010 ORTHO05D009917 4.2e-13 78.6 133 40.6
vmacro21500 Vaccinium macrocarpon HOM05D000010 ORTHO05D009917 4.2e-13 78.6 129 41.9
Gohir.A05G204200 Gossypium hirsutum HOM05D000010 ORTHO05D009917 5.5e-13 78.2 133 42.1
Cpa.g.sc21.174 Carica papaya HOM05D000010 ORTHO05D009917 1.2e-12 77.0 132 36.4
Duzib116G0403 Durio zibethinus HOM05D000010 ORTHO05D009917 2.1e-12 76.3 132 42.4
PGSC0003DMG400007953 Solanum tuberosum HOM05D000010 ORTHO05D009917 2.7e-12 75.9 130 37.7
CiPaw.16G040300 Carya illinoinensis HOM05D000010 ORTHO05D009917 3.5e-12 75.5 61 63.9
Solyc04g078670.3 Solanum lycopersicum HOM05D000010 ORTHO05D009917 3.5e-12 75.5 131 37.4
DCAR_002069 Daucus carota HOM05D000010 ORTHO05D009917 1.0e-11 73.9 134 40.3
COL.COLO4_26548 Corchorus olitorius HOM05D000010 ORTHO05D009917 3.9e-11 72.0 132 38.6
Cc10_g04680 Coffea canephora HOM05D000010 ORTHO05D009917 1.5e-10 70.1 130 35.4
AUR62022486 Chenopodium quinoa HOM05D000010 ORTHO05D009917 9.6e-10 67.4 128 38.3
Nitab4.5_0000287g0080 Nicotiana tabacum HOM05D000010 ORTHO05D009917 1.1e-08 63.9 130 33.8
Sc15g0005970 Simmondsia chinensis HOM05D000010 ORTHO05D009917 1.1e-08 63.9 131 34.4
Lalb_Chr14g0368581 Lupinus albus HOM05D000010 ORTHO05D009917 2.4e-08 62.8 143 37.1
TAR376G0988 Trochodendron aralioides HOM05D000010 ORTHO05D009917 3.1e-08 62.4 144 34.0
PGR083G1243 Punica granatum HOM05D000010 ORTHO05D009917 4.0e-08 62.0 139 33.8
Atru.chr13.726 Acer truncatum HOM05D000010 ORTHO05D009917 6.9e-08 61.2 47 63.8
Duzib093G0291 Durio zibethinus HOM05D000010 ORTHO05D009917 9.0e-08 60.8 130 39.2
TAR628G1728 Trochodendron aralioides HOM05D000010 ORTHO05D009917 9.0e-08 60.8 138 34.1
Glyma.17G240700 Glycine max HOM05D000010 ORTHO05D009917 3.4e-07 58.9 134 35.1
TAR625G1118 Trochodendron aralioides HOM05D000010 ORTHO05D009917 5.8e-07 58.2 143 32.2
arahy.Tifrunner.gnm1.ann1.5AD6K9 Arachis hypogaea HOM05D000010 ORTHO05D009917 1.0e-06 57.4 41 68.3
arahy.Tifrunner.gnm1.ann1.Z8VU36 Arachis hypogaea HOM05D000010 ORTHO05D009917 1.0e-06 57.4 41 68.3
ClCG05G020030 Citrullus lanatus HOM05D000010 ORTHO05D009917 2.9e-06 55.8 144 34.7
Glyma.14G084300 Glycine max HOM05D000010 ORTHO05D009917 8.4e-06 54.3 132 33.3


User provided reference genes

Program Settings