Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0396861 Rosa chinensis HOM05D000256 ORTHO05D000119 1.4e-44 182.6 90 100.0
Prupe.1G059200 Prunus persica HOM05D000256 ORTHO05D000119 2.9e-10 68.6 77 48.1
MD13G1228100 Malus domestica HOM05D000256 ORTHO05D000119 1.4e-09 66.2 85 47.1
MD05G1264900 Malus domestica HOM05D000256 ORTHO05D000119 1.6e-08 62.8 79 44.3
Prupe.1G057700 Prunus persica HOM05D000256 ORTHO05D000119 2.1e-08 62.4 85 50.6
RcHm_v2.0_Chr7g0215481 Rosa chinensis HOM05D000256 ORTHO05D000119 3.5e-08 61.6 86 40.7
Nitab4.5_0000401g0130 Nicotiana tabacum HOM05D000256 ORTHO05D000119 2.3e-07 58.9 53 47.2
Nitab4.5_0000401g0140 Nicotiana tabacum HOM05D000256 ORTHO05D000119 2.3e-07 58.9 49 51.0
Lalb_Chr13g0292011 Lupinus albus HOM05D000256 ORTHO05D000119 5.1e-07 57.8 75 42.7
Nitab4.5_0003370g0020 Nicotiana tabacum HOM05D000256 ORTHO05D000119 5.1e-07 57.8 55 45.5
Lalb_Chr15g0076131 Lupinus albus HOM05D000256 ORTHO05D000119 6.6e-07 57.4 75 40.0
Prupe.1G059000 Prunus persica HOM05D000256 ORTHO05D000119 1.1e-06 56.6 85 41.2
MD00G1101200 Malus domestica HOM05D000256 ORTHO05D000119 1.5e-06 56.2 86 41.9
Prupe.1G059300 Prunus persica HOM05D000256 ORTHO05D000119 1.5e-06 56.2 78 44.9
TAR365G0031 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.5e-06 55.5 71 38.0
Lalb_Chr02g0153171 Lupinus albus HOM05D000256 ORTHO05D000119 3.3e-06 55.1 75 44.0
SalBow4G1737 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.3e-06 55.1 76 38.2
unitig_899.g15047 Utricularia gibba HOM05D000256 ORTHO05D000119 3.3e-06 55.1 79 35.4
unitig_899.g15048 Utricularia gibba HOM05D000256 ORTHO05D000119 3.3e-06 55.1 79 39.2
Thhalv10015914m.g Eutrema salsugineum HOM05D003012 ORTHO05D000119 4.3e-06 54.7 54 44.4
Prupe.1G058600 Prunus persica HOM05D000256 ORTHO05D000119 4.3e-06 54.7 85 38.8
Gorai.009G340000 Gossypium raimondii HOM05D000256 ORTHO05D000119 5.6e-06 54.3 55 52.7
Lalb_Chr11g0072411 Lupinus albus HOM05D000256 ORTHO05D000119 5.6e-06 54.3 81 35.8
PGR044G1572 Punica granatum HOM05D000256 ORTHO05D000119 5.6e-06 54.3 78 42.3
Sc18g0002440 Simmondsia chinensis HOM05D000256 ORTHO05D000119 5.6e-06 54.3 50 52.0
EL10Ac1g01186 Beta vulgaris HOM05D000256 ORTHO05D000119 7.3e-06 53.9 79 40.5
FAN10G1492 Fragaria x ananassa HOM05D000256 ORTHO05D000119 7.3e-06 53.9 73 42.5
Sed0027955 Sechium edule HOM05D000256 ORTHO05D000119 7.3e-06 53.9 77 39.0
TAR365G0936 Trochodendron aralioides HOM05D000256 ORTHO05D000119 7.3e-06 53.9 71 36.6
CANSAT78G0119 Cannabis sativa HOM05D000256 ORTHO05D000119 9.6e-06 53.5 82 40.2
Eucgr.E00708 Eucalyptus grandis HOM05D000256 ORTHO05D000119 9.6e-06 53.5 73 37.0
MD05G1264800 Malus domestica HOM05D000256 ORTHO05D000119 9.6e-06 53.5 77 41.6


User provided reference genes

Program Settings