Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0396821 Rosa chinensis HOM05D008849 ORTHO05D010556 5.3e-80 300.8 139 100.0
FAN17G2089 Fragaria x ananassa HOM05D008849 ORTHO05D010556 7.2e-61 237.3 139 81.3
FvH4_4g05643 Fragaria vesca HOM05D008849 ORTHO05D010556 1.4e-59 233.0 139 81.3
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 3.0e-22 109.0 120 41.7
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 8.6e-22 107.5 120 40.0
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 7.3e-21 104.4 120 38.3
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 2.8e-20 102.4 134 38.1
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 2.4e-19 99.4 136 37.5
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 5.2e-19 98.2 116 36.2
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 2.0e-18 96.3 128 35.9
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 3.4e-18 95.5 106 37.7
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 3.4e-18 95.5 130 37.7
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 4.4e-18 95.1 109 39.4
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 7.6e-18 94.4 104 38.5
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 9.9e-18 94.0 107 40.2
COL.COLO4_34095 Corchorus olitorius HOM05D008849 ORTHO05D010556 2.9e-17 92.4 126 35.7
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 2.9e-17 92.4 116 34.5
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 9.3e-16 87.4 137 32.8
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 9.3e-16 87.4 127 32.3
Gohir.A09G202100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.7e-15 85.9 139 32.4
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 6.0e-15 84.7 132 31.8
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 7.8e-15 84.3 126 33.3
Gohir.D09G196100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 7.8e-15 84.3 139 31.7
Gorai.006G219500 Gossypium raimondii HOM05D008849 ORTHO05D010556 7.8e-15 84.3 139 31.7
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 1.7e-14 83.2 109 38.5
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 2.3e-14 82.8 134 30.6
Gohir.A10G120800 Gossypium hirsutum HOM05D008849 ORTHO05D010556 5.1e-14 81.6 134 29.1
Potri.002G263900 Populus trichocarpa HOM05D008849 ORTHO05D010556 8.7e-14 80.9 124 30.6
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 8.7e-14 80.9 114 31.6
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 6.2e-12 74.7 95 33.7
Eucgr.E01057 Eucalyptus grandis HOM05D008849 ORTHO05D010556 9.0e-11 70.9 106 31.1
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 1.5e-10 70.1 131 30.5
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 1.5e-10 70.1 103 34.0
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 2.0e-10 69.7 137 28.5
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 1.7e-09 66.6 103 34.0
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 1.1e-08 63.9 122 30.3
QL11p023932 Quercus lobata HOM05D008849 ORTHO05D010556 2.4e-08 62.8 90 34.4
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.4e-08 62.8 114 30.7
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 1.6e-07 60.1 122 29.5
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.1e-07 59.7 97 30.9
TPR.G17735 Trifolium pratense HOM05D014907 ORTHO05D010556 5.1e-06 55.1 126 26.2


User provided reference genes

Program Settings