Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0396781 Rosa chinensis HOM05D019778 ORTHO05D000119 9.1e-37 156.4 78 100.0
FAN12G3699 Fragaria x ananassa HOM05D000256 ORTHO05D000119 7.0e-29 130.2 79 83.5
FvH4_4g05620 Fragaria vesca HOM05D000256 ORTHO05D000119 1.7e-27 125.6 79 81.0
RcHm_v2.0_Chr4g0396791 Rosa chinensis HOM05D000256 ORTHO05D000119 6.8e-24 113.6 77 72.7
MD17G1052600 Malus domestica HOM05D000256 ORTHO05D000119 8.0e-09 63.5 73 47.9
Prupe.1G058100 Prunus persica HOM05D000256 ORTHO05D000119 1.4e-08 62.8 84 45.2
RcHm_v2.0_Chr4g0396771 Rosa chinensis HOM05D000256 ORTHO05D000119 4.0e-08 61.2 79 40.5
FAN22G2207 Fragaria x ananassa HOM05D001801 ORTHO05D001739 5.2e-08 60.8 64 46.9
Prupe.1G055600 Prunus persica HOM05D000256 ORTHO05D000119 6.8e-08 60.5 76 43.4
Prupe.1G057300 Prunus persica HOM05D000256 ORTHO05D000119 1.2e-07 59.7 77 40.3
TPR.G20862 Trifolium pratense HOM05D000256 ORTHO05D000119 2.0e-07 58.9 65 41.5
Atru.chr6.3153 Acer truncatum HOM05D000256 ORTHO05D000119 3.4e-07 58.2 67 41.8
Medtr7g031780 Medicago truncatula HOM05D000256 ORTHO05D000119 3.4e-07 58.2 55 49.1
RcHm_v2.0_Chr6g0244081 Rosa chinensis HOM05D000256 ORTHO05D000119 4.4e-07 57.8 69 37.7
MD14G1004300 Malus domestica HOM05D000256 ORTHO05D000119 5.8e-07 57.4 77 42.9
FvH4_4g02030 Fragaria vesca HOM05D000256 ORTHO05D000119 9.8e-07 56.6 76 39.5
RcHm_v2.0_Chr5g0071851 Rosa chinensis HOM05D019778 ORTHO05D025468 9.8e-07 56.6 79 40.5
FAN22G0130 Fragaria x ananassa HOM05D000256 ORTHO05D000119 1.3e-06 56.2 76 38.2
FvH4_2g16811 Fragaria vesca HOM05D019778 ORTHO05D025468 2.2e-06 55.5 76 42.1
FAN17G1360 Fragaria x ananassa HOM05D000256 ORTHO05D000119 2.2e-06 55.5 72 40.3
FAN17G2680 Fragaria x ananassa HOM05D000256 ORTHO05D000119 2.2e-06 55.5 72 40.3
FAN24G2184 Fragaria x ananassa HOM05D019778 ORTHO05D025468 2.2e-06 55.5 76 42.1
RcHm_v2.0_Chr4g0389421 Rosa chinensis HOM05D000256 ORTHO05D000119 2.2e-06 55.5 77 44.2
MD10G1085700 Malus domestica HOM05D000256 ORTHO05D000119 2.9e-06 55.1 77 35.1
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 3.7e-06 54.7 76 38.2
RcHm_v2.0_Chr5g0046141 Rosa chinensis HOM05D000256 ORTHO05D000119 3.7e-06 54.7 74 37.8
RcHm_v2.0_Chr6g0312461 Rosa chinensis HOM05D000256 ORTHO05D000119 3.7e-06 54.7 76 39.5
FAN02G0385 Fragaria x ananassa HOM05D019778 ORTHO05D025468 4.9e-06 54.3 68 36.8
FAN12G3753 Fragaria x ananassa HOM05D000256 ORTHO05D000119 6.4e-06 53.9 67 40.3
MD13G1228100 Malus domestica HOM05D000256 ORTHO05D000119 6.4e-06 53.9 72 38.9
RcHm_v2.0_Chr4g0389011 Rosa chinensis HOM05D000256 ORTHO05D000119 6.4e-06 53.9 77 41.6
TWI74G1354 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 6.4e-06 53.9 62 38.7
RcHm_v2.0_Chr6g0312471 Rosa chinensis HOM05D000256 ORTHO05D000119 8.3e-06 53.5 76 39.5


User provided reference genes

Program Settings