Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0396361 Rosa chinensis HOM05D008722 ORTHO05D000031 1.2e-62 243.0 124 100.0
RcHm_v2.0_Chr5g0016281 Rosa chinensis HOM05D000030 ORTHO05D000009 3.9e-58 228.0 123 94.3
RcHm_v2.0_Chr4g0423601 Rosa chinensis HOM05D000030 ORTHO05D000031 9.6e-57 223.4 123 92.7
RcHm_v2.0_Chr7g0242101 Rosa chinensis HOM05D000030 ORTHO05D000031 2.8e-56 221.9 123 91.9
RcHm_v2.0_Chr2g0141501 Rosa chinensis HOM05D008722 ORTHO05D000009 1.0e-37 160.2 120 68.3
RcHm_v2.0_Chr2g0170381 Rosa chinensis HOM05D000030 ORTHO05D000009 2.4e-23 112.5 127 48.8
FvH4_4g09691 Fragaria vesca HOM05D008722 ORTHO05D000031 9.4e-20 100.5 123 43.9
RcHm_v2.0_Chr7g0202411 Rosa chinensis HOM05D000030 ORTHO05D000031 1.0e-18 97.1 127 39.4
RcHm_v2.0_Chr3g0467291 Rosa chinensis HOM05D000030 ORTHO05D000009 1.8e-18 96.3 126 40.5
FvH4_4g08801 Fragaria vesca HOM05D000030 ORTHO05D000031 8.8e-18 94.0 124 37.1
MD05G1210500 Malus domestica HOM05D000030 ORTHO05D000031 2.1e-11 72.8 133 32.3
FvH4_1g22411 Fragaria vesca HOM05D008722 ORTHO05D012680 3.6e-11 72.0 65 40.0
FvH4_4g08852 Fragaria vesca HOM05D008722 ORTHO05D000031 3.6e-11 72.0 66 42.4
FvH4_6g16042 Fragaria vesca HOM05D008722 ORTHO05D012680 3.6e-11 72.0 65 40.0
FvH4_6g40821 Fragaria vesca HOM05D008722 ORTHO05D012680 2.3e-10 69.3 65 38.5
FvH4_3g15421 Fragaria vesca HOM05D008722 ORTHO05D012680 3.0e-10 68.9 65 38.5
RcHm_v2.0_Chr2g0142391 Rosa chinensis HOM05D000030 ORTHO05D000031 3.0e-10 68.9 128 34.4
FvH4_6g52721 Fragaria vesca HOM05D008722 ORTHO05D000031 5.2e-10 68.2 100 33.0
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 1.2e-09 67.0 128 32.0
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 3.4e-09 65.5 138 29.0
RcHm_v2.0_Chr5g0007101 Rosa chinensis HOM05D000030 ORTHO05D000031 3.4e-09 65.5 132 29.5
FvH4_5g32331 Fragaria vesca HOM05D000030 ORTHO05D000031 9.8e-09 63.9 102 38.2
RcHm_v2.0_Chr3g0496341 Rosa chinensis HOM05D000030 ORTHO05D000031 1.3e-08 63.5 128 31.2
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 1.1e-07 60.5 127 29.9
Aqoxy7G02386 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 4.1e-07 58.5 129 27.1
RcHm_v2.0_Chr6g0283851 Rosa chinensis HOM05D000030 ORTHO05D000031 4.1e-07 58.5 137 31.4
RcHm_v2.0_Chr4g0396801 Rosa chinensis HOM05D000030 ORTHO05D000031 1.2e-06 57.0 131 29.0
Hma1.2p1_0081F.1_g042310 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-06 55.5 64 37.5
Hma1.2p1_1202F.1_g266820 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-06 55.5 64 37.5
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 3.5e-06 55.5 130 30.8
FvH4_3g22571 Fragaria vesca HOM05D016514 ORTHO05D013153 5.9e-06 54.7 66 34.8
Oeu025113.1 Olea europaea HOM05D000030 ORTHO05D000031 5.9e-06 54.7 123 28.5
FvH4_4g06882 Fragaria vesca HOM05D000030 ORTHO05D000031 7.7e-06 54.3 135 31.1
RcHm_v2.0_Chr5g0031071 Rosa chinensis HOM05D000030 ORTHO05D000031 7.7e-06 54.3 132 29.5


User provided reference genes

Program Settings