Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 1.0e-235 819.7 408 100.0
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 3.5e-220 768.1 408 94.1
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 1.9e-218 762.3 408 94.1
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 2.5e-194 682.2 411 84.9
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 1.4e-173 613.2 381 80.3
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 1.2e-172 610.1 384 78.4
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 3.3e-170 602.1 392 76.3
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 1.1e-168 597.0 419 73.7
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 6.8e-168 594.3 393 75.6
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 7.6e-167 590.9 382 77.0
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 4.9e-166 588.2 382 75.7
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 4.9e-166 588.2 392 74.2
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 5.4e-165 584.7 385 74.8
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 6.0e-164 581.3 383 76.5
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 7.8e-164 580.9 386 75.9
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.3e-163 580.1 384 75.5
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 1.7e-163 579.7 409 71.4
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 5.1e-163 578.2 354 83.1
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 8.7e-163 577.4 419 72.1
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.1e-162 577.0 384 75.3
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 1.2e-161 573.5 400 72.8
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 1.6e-161 573.2 382 74.9
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.8e-160 569.7 383 73.4
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 5.8e-159 564.7 387 72.4
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 9.9e-159 563.9 378 73.0
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 1.1e-157 560.5 393 72.0
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 1.4e-157 560.1 388 73.5
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 5.4e-157 558.1 376 74.5
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 2.1e-156 556.2 382 72.0
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 4.6e-156 555.1 376 74.2
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 7.8e-156 554.3 376 75.3
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 8.7e-155 550.8 387 70.8
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 2.5e-154 549.3 382 71.2
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 5.6e-154 548.1 387 69.5
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 5.6e-154 548.1 387 69.8
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 2.1e-153 546.2 380 71.3
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 2.8e-153 545.8 382 71.5
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 4.8e-153 545.0 381 70.6
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.4e-152 543.5 395 69.4
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 6.9e-152 541.2 375 71.7
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 9.0e-152 540.8 419 66.6
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.4e-149 533.5 340 75.9
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 4.2e-149 531.9 372 68.8
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.2e-149 531.9 358 73.2
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 9.3e-149 530.8 368 72.0
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 2.1e-148 529.6 383 68.7
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 2.1e-148 529.6 394 67.5
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 1.0e-147 527.3 380 68.7
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 1.3e-147 526.9 418 65.8
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 3.0e-147 525.8 372 70.7
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 3.9e-147 525.4 377 68.2
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 6.7e-147 524.6 382 69.6
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 1.5e-146 523.5 385 68.8
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 5.6e-146 521.5 384 68.2
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 1.6e-145 520.0 366 72.1
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 1.6e-145 520.0 368 69.6
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.8e-145 519.2 372 68.8
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 3.7e-145 518.8 373 68.1
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 4.8e-145 518.5 368 70.4
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 4.0e-144 515.4 390 67.2
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 5.3e-144 515.0 368 70.1
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 5.8e-143 511.5 374 68.4
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 5.8e-143 511.5 382 68.3
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 4.9e-142 508.4 382 67.5
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 4.9e-142 508.4 382 67.5
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 6.4e-142 508.1 382 67.5
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 8.4e-142 507.7 393 64.6
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 1.6e-140 503.4 370 69.7
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 6.0e-140 501.5 394 67.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 1.9e-138 496.5 372 69.1
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 4.0e-136 488.8 382 66.2
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 5.3e-136 488.4 372 66.4
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 2.0e-135 486.5 319 76.2
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 3.4e-135 485.7 408 60.3
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.0e-134 484.2 375 66.4
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 1.3e-134 483.8 331 74.6
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 8.4e-134 481.1 420 60.2
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 2.1e-132 476.5 376 64.6
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 3.5e-132 475.7 386 64.0
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 4.6e-132 475.3 407 61.4
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 4.6e-132 475.3 334 72.8
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 6.3e-129 464.9 375 62.9
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 1.1e-128 464.2 386 62.7
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 4.2e-125 452.2 311 74.9
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 2.1e-124 449.9 414 59.4
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 1.1e-120 437.6 336 68.2
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 3.1e-120 436.0 408 56.6
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 4.1e-120 435.6 290 72.4
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 1.3e-118 430.6 282 76.2
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 6.7e-115 418.3 277 72.2
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 7.0e-112 408.3 270 74.8
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 1.3e-110 404.1 324 64.8
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 1.2e-103 380.9 401 49.9
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 1.7e-102 377.1 405 48.9
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 5.0e-102 375.6 277 69.3
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 6.8e-99 365.2 274 66.8
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 8.3e-97 358.2 324 59.6
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 2.5e-93 346.7 392 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 2.3e-70 270.4 326 46.0
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 3.7e-57 226.5 395 37.7
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 1.5e-50 204.5 167 65.9
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 3.1e-43 180.3 221 46.2
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 5.4e-40 169.5 233 42.1
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 5.6e-37 159.5 107 70.1
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 4.8e-28 129.8 72 84.7
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 1.4e-24 118.2 71 77.5
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 2.0e-18 97.8 55 81.8
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 1.3e-17 95.1 55 78.2
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 8.4e-17 92.4 70 62.9
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 5.1e-14 83.2 282 26.6
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 5.3e-11 73.2 96 42.7
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 3.9e-06 57.0 256 24.6


User provided reference genes

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