Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr4g0387911 Rosa chinensis HOM05D000141 ORTHO05D001311 8.1e-24 112.8 55 100.0
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 6.3e-08 60.1 32 84.4
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 5.3e-07 57.0 32 78.1
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 9.0e-07 56.2 32 78.1
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 9.0e-07 56.2 32 78.1
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 9.0e-07 56.2 32 78.1
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 9.0e-07 56.2 32 78.1
FAN21G3407 Fragaria x ananassa HOM05D000141 ORTHO05D001311 9.0e-07 56.2 32 78.1
Sabra16G0290400 Salix brachista HOM05D000141 ORTHO05D001311 9.0e-07 56.2 46 58.7
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 1.2e-06 55.8 31 80.6
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 1.2e-06 55.8 32 78.1
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.5e-06 55.5 28 85.7
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.5e-06 55.5 28 85.7
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 1.5e-06 55.5 28 85.7
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 1.5e-06 55.5 28 85.7
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 2.6e-06 54.7 32 75.0
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 2.6e-06 54.7 32 75.0
FAN25G3242 Fragaria x ananassa HOM05D000141 ORTHO05D001311 3.4e-06 54.3 32 71.9
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 3.4e-06 54.3 28 82.1
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 3.4e-06 54.3 28 82.1
PGR031G0118 Punica granatum HOM05D000141 ORTHO05D001311 3.4e-06 54.3 28 82.1
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 4.5e-06 53.9 28 82.1
Lalb_Chr20g0108861 Lupinus albus HOM05D000141 ORTHO05D001311 4.5e-06 53.9 28 85.7
Thecc.07G158700 Theobroma cacao HOM05D000141 ORTHO05D001311 4.5e-06 53.9 28 85.7
CAN.G164.4 Capsicum annuum HOM05D000141 ORTHO05D001311 5.9e-06 53.5 54 48.1
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 5.9e-06 53.5 28 82.1
Solyc12g011290.2 Solanum lycopersicum HOM05D000141 ORTHO05D001311 5.9e-06 53.5 28 82.1
Sopen12g006620 Solanum pennellii HOM05D000141 ORTHO05D001311 5.9e-06 53.5 28 82.1
PGSC0003DMG401007845 Solanum tuberosum HOM05D000141 ORTHO05D001311 5.9e-06 53.5 28 82.1
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 7.7e-06 53.1 32 75.0
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 1.0e-05 52.8 28 82.1
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 1.0e-05 52.8 28 78.6
Sabra16G0291500 Salix brachista HOM05D000141 ORTHO05D001311 1.0e-05 52.8 46 56.5
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 1.0e-05 52.8 28 82.1


User provided reference genes

Program Settings