Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 1.7e-94 349.4 180 100.0
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.0e-78 297.0 197 81.2
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 2.0e-63 246.1 191 70.7
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.6e-60 236.5 191 68.6
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 5.3e-56 221.5 170 71.2
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 2.2e-54 216.1 183 65.6
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 4.0e-43 178.7 198 54.0
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 5.5e-29 131.7 70 87.1
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 1.6e-28 130.2 198 43.9
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 4.7e-28 128.6 73 97.3
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 6.8e-27 124.8 192 42.2
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 1.6e-23 113.6 78 62.8
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 4.5e-23 112.1 78 61.5
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 1.8e-19 100.1 112 58.0
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.5e-13 80.5 75 52.0
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.1e-11 74.3 80 42.5
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.0e-11 72.4 80 46.2
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.2e-10 70.9 80 47.5
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.4e-10 69.3 80 42.5
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 9.8e-10 67.8 80 41.2
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.7e-09 67.0 64 48.4
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.7e-09 67.0 64 48.4
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.9e-09 66.2 107 38.3
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 6.4e-09 65.1 92 41.3
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 8.3e-09 64.7 79 43.0
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 1.1e-08 64.3 79 43.0
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-08 63.9 66 51.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-08 63.5 75 44.0
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-08 63.5 76 47.4
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 1.9e-08 63.5 79 40.5
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 3.2e-08 62.8 107 36.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 4.1e-08 62.4 79 40.5
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.0e-08 61.6 86 38.4
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 9.2e-08 61.2 75 44.0
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.6e-07 60.5 76 44.7
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 1.6e-07 60.5 50 48.0
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.0e-07 58.5 136 33.8
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 7.8e-07 58.2 75 38.7
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.8e-07 58.2 78 43.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.3e-06 57.4 66 39.4
RcHm_v2.0_Chr4g0415851 Rosa chinensis HOM05D009091 ORTHO05D003768 1.3e-06 57.4 36 66.7
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 2.3e-06 56.6 115 30.4
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 3.9e-06 55.8 80 37.5


User provided reference genes

Program Settings