Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0494701 Rosa chinensis HOM05D000593 ORTHO05D000562 8.5e-69 263.5 125 100.0
RcHm_v2.0_Chr4g0385841 Rosa chinensis HOM05D000593 ORTHO05D000562 8.2e-64 246.9 124 91.9
RcHm_v2.0_Chr1g0341531 Rosa chinensis HOM05D000593 ORTHO05D000562 3.9e-58 228.0 124 85.5
FvH4_4g15922 Fragaria vesca HOM05D000593 ORTHO05D000562 2.6e-57 225.3 124 82.3
FvH4_1g20063 Fragaria vesca HOM05D000593 ORTHO05D000562 3.3e-57 224.9 123 83.7
FvH4_3g28681 Fragaria vesca HOM05D000593 ORTHO05D000562 1.6e-54 216.1 124 82.3
Hma1.2p1_0661F.1_g197880 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 4.0e-42 174.9 124 63.7
Prupe.7G144600 Prunus persica HOM05D000593 ORTHO05D000562 1.2e-41 173.3 124 65.3
Hma1.2p1_2393F.1_g321260 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.7e-40 168.3 124 62.1
Hma1.2p1_2537F.1_g324080 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.1e-39 166.8 124 61.3
Dinv29499 Davidia involucrata HOM05D002092 ORTHO05D000562 4.1e-39 164.9 124 61.3
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-37 158.7 124 60.5
Rhsim03G0114700 Rhododendron simsii HOM05D000593 ORTHO05D000562 6.5e-37 157.5 122 60.7
Rhsim09G0113400 Rhododendron simsii HOM05D000593 ORTHO05D000562 6.5e-37 157.5 122 60.7
Rhsim07G0040700 Rhododendron simsii HOM05D000593 ORTHO05D000562 8.6e-37 157.1 124 57.3
Rhsim06G0076500 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.1e-36 156.8 124 60.5
Hma1.2p1_3726F.1_g337390 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.5e-36 155.6 117 59.8
Hma1.2p1_1305F.1_g274530 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.3e-36 155.2 109 64.2
Aqoxy4G00841 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.4e-34 149.8 124 57.3
Hma1.2p1_0200F.1_g086095 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.4e-34 149.8 124 58.1
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 3.0e-34 148.7 124 60.5
Rhsim06G0070800 Rhododendron simsii HOM05D000593 ORTHO05D000562 4.0e-34 148.3 124 57.3
AUR62042573 Chenopodium quinoa HOM05D000593 ORTHO05D000562 1.5e-33 146.4 122 55.7
Hma1.2p1_2691F.1_g327000 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 7.5e-33 144.1 124 53.2
Aqoxy2G01181 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.3e-32 143.3 124 54.0
Rhsim13G0144200 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.3e-32 143.3 113 61.1
ECA247G0154 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.2e-32 142.5 124 52.4
Rhsim01G0017600 Rhododendron simsii HOM05D000593 ORTHO05D000562 4.9e-32 141.4 118 57.6
Rhsim04G0198300 Rhododendron simsii HOM05D000593 ORTHO05D000562 4.9e-32 141.4 106 60.4
Hma1.2p1_0362F.1_g136030 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.1e-31 140.2 124 56.5
Hma1.2p1_1991F.1_g310200 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 4.1e-31 138.3 123 52.8
ECA240G3974 Erigeron canadensis HOM05D000398 ORTHO05D007380 1.2e-30 136.7 124 50.8
ECA232G0916 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.2e-27 126.7 116 50.9
ECA236G3455 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.0e-26 122.1 123 48.8
Hma1.2p1_0312F.1_g121360 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 5.2e-26 121.3 92 59.8
Rhsim09G0181600 Rhododendron simsii HOM05D000518 ORTHO05D000562 2.2e-24 115.9 85 62.4
ECA233G2080 Erigeron canadensis HOM05D000228 ORTHO05D001545 3.7e-24 115.2 84 61.9
FvH4_2g15231 Fragaria vesca HOM05D000593 ORTHO05D000562 5.4e-23 111.3 62 88.7
Aqoxy2G01326 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.5e-20 103.2 124 42.7
Rhsim06G0117200 Rhododendron simsii HOM05D000593 ORTHO05D000562 2.8e-19 99.0 72 62.5
Hma1.2p1_0001F.1_g001370 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.4e-18 96.7 77 55.8
Hma1.2p1_0111F.1_g053590 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 8.9e-18 94.0 86 52.3
Pp3c5_649 Physcomitrium patens HOM05D000593 ORTHO05D000562 5.8e-17 91.3 108 42.6
Mapoly0010s0039 Marchantia polymorpha HOM05D000593 ORTHO05D000562 9.8e-17 90.5 123 37.4
Mapoly0138s0003 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.9e-16 89.0 98 43.9
ECA234G4851 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.9e-16 88.2 126 41.3
TWI75G1511 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.7e-14 82.4 116 33.6
Mapoly0002s0252 Marchantia polymorpha HOM05D000593 ORTHO05D000562 3.5e-14 82.0 101 42.6
TWI36G0859 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.0e-14 81.3 116 39.7
Hma1.2p1_0638F.1_g193680 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.7e-13 79.7 70 52.9
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 2.3e-13 79.3 109 38.5
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 3.0e-13 79.0 105 41.0
vmacro10973 Vaccinium macrocarpon HOM05D000593 ORTHO05D000562 3.0e-13 79.0 118 36.4
TWI56G0914 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-12 77.0 111 36.9
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-12 76.6 122 34.4
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 1.9e-12 76.3 109 37.6
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 1.9e-12 76.3 105 41.0
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-12 76.3 97 39.2
TWI79G0388 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.5e-12 75.9 130 33.1
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 9.5e-12 73.9 123 35.0
FvH4_5g13893 Fragaria vesca HOM05D000593 ORTHO05D000562 9.5e-12 73.9 115 35.7
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 9.5e-12 73.9 122 34.4
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 9.5e-12 73.9 124 33.1
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 1.2e-11 73.6 109 34.9
TWI36G0901 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-11 73.2 118 34.7
Pp3c9_25000 Physcomitrium patens HOM05D000593 ORTHO05D000562 2.1e-11 72.8 90 35.6
TWI32G0746 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.6e-11 72.0 122 32.0
Aqoxy2G01938 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.2e-11 71.2 113 34.5
EL10Ac2g02647 Beta vulgaris HOM05D000593 ORTHO05D000562 8.1e-11 70.9 123 33.3
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 8.1e-11 70.9 123 33.3
PSO063G4888 Papaver somniferum HOM05D000593 ORTHO05D000562 8.1e-11 70.9 126 31.7
Pp3c10_5740 Physcomitrium patens HOM05D000593 ORTHO05D000562 1.4e-10 70.1 81 39.5
Pp3c11_24740 Physcomitrium patens HOM05D000593 ORTHO05D000562 1.4e-10 70.1 103 36.9
Ca_26997_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.8e-10 69.7 119 37.0
TWI56G1041 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.8e-10 69.7 102 35.3
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 3.1e-10 68.9 78 42.3
PSO782G4983 Papaver somniferum HOM05D000593 ORTHO05D000562 3.1e-10 68.9 105 36.2
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 4.0e-10 68.6 109 34.9
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 4.0e-10 68.6 109 34.9
Mapoly0005s0183 Marchantia polymorpha HOM05D000593 ORTHO05D000562 4.0e-10 68.6 54 53.7
PSO386G0280 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-10 68.6 124 28.2
PSO063G3063 Papaver somniferum HOM05D000593 ORTHO05D000562 5.2e-10 68.2 116 34.5
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.8e-10 67.8 66 48.5
Hma1.2p1_0353F.1_g133160 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 6.8e-10 67.8 123 35.0
PSO063G7547 Papaver somniferum HOM05D000593 ORTHO05D000562 6.8e-10 67.8 105 35.2
Mapoly0014s0010 Marchantia polymorpha HOM05D000593 ORTHO05D000562 8.9e-10 67.4 57 54.4
Mapoly0014s0016 Marchantia polymorpha HOM05D000593 ORTHO05D000562 8.9e-10 67.4 57 54.4
PSO585G0009 Papaver somniferum HOM05D000593 ORTHO05D000562 8.9e-10 67.4 104 35.6
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.2e-09 67.0 108 34.3
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.2e-09 67.0 111 31.5
AUR62008504 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.2e-09 67.0 82 42.7
AUR62015706 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.2e-09 67.0 82 41.5
Ca_02694_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.2e-09 67.0 119 35.3
Migut.D01884 Erythranthe guttata HOM05D000593 ORTHO05D000562 1.2e-09 67.0 104 34.6
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 1.2e-09 67.0 108 36.1
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 1.5e-09 66.6 123 30.9
TWI32G1282 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-09 66.6 122 31.1
PSO384G2519 Papaver somniferum HOM05D000593 ORTHO05D000562 2.0e-09 66.2 87 37.9
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.0e-09 66.2 85 38.8
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.6e-09 65.9 111 33.3
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 2.6e-09 65.9 124 29.0
PSO724G1093 Papaver somniferum HOM05D000593 ORTHO05D000562 3.4e-09 65.5 124 26.6
TWI12G0648 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.4e-09 65.5 118 30.5
Mapoly0007s0022 Marchantia polymorpha HOM05D000593 ORTHO05D000562 4.4e-09 65.1 93 38.7
PSO541G2752 Papaver somniferum HOM05D000593 ORTHO05D000562 4.4e-09 65.1 126 31.7
PSO675G4112 Papaver somniferum HOM05D000593 ORTHO05D000562 4.4e-09 65.1 122 32.8
PSO832G1919 Papaver somniferum HOM05D000593 ORTHO05D000562 5.8e-09 64.7 124 28.2
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.8e-09 64.7 85 38.8
Ah.01g016220 Amaranthus hybridus HOM05D012566 ORTHO05D000562 7.5e-09 64.3 108 26.9
PSO386G0211 Papaver somniferum HOM05D000593 ORTHO05D000562 7.5e-09 64.3 118 28.8
PSO541G6383 Papaver somniferum HOM05D000593 ORTHO05D000562 7.5e-09 64.3 131 29.8
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-08 63.5 103 36.9
TWI09G0669 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-08 63.5 106 34.0
Ah.01g016390 Amaranthus hybridus HOM05D000593 ORTHO05D000562 1.7e-08 63.2 108 27.8
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.7e-08 63.2 78 38.5
Mapoly0020s0096 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.2e-08 62.8 96 37.5
PSO675G7774 Papaver somniferum HOM05D000593 ORTHO05D000562 2.2e-08 62.8 82 43.9
PSO832G3255 Papaver somniferum HOM05D000593 ORTHO05D000562 2.2e-08 62.8 93 35.5
TWI79G0990 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-08 62.8 86 38.4
Hma1.2p1_0319F.1_g123940 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.9e-08 62.4 129 31.8
Mapoly0055s0046 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.9e-08 62.4 105 33.3
EL10Ac1g01376 Beta vulgaris HOM05D000593 ORTHO05D000562 3.7e-08 62.0 81 38.3
AUR62015704 Chenopodium quinoa HOM05D012566 ORTHO05D000562 3.7e-08 62.0 72 44.4
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 3.7e-08 62.0 125 30.4
TWI34G1957 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.7e-08 62.0 66 43.9
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.9e-08 61.6 118 32.2
Ca_06057_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.9e-08 61.6 118 32.2
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.9e-08 61.6 118 32.2
PSO675G4622 Papaver somniferum HOM05D000593 ORTHO05D000562 4.9e-08 61.6 126 31.0
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-08 61.2 105 35.2
PSO063G3477 Papaver somniferum HOM05D000593 ORTHO05D000562 6.4e-08 61.2 126 27.8
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.4e-08 61.2 104 32.7
PSO832G2496 Papaver somniferum HOM05D000593 ORTHO05D000562 8.3e-08 60.8 124 28.2
PSO063G7449 Papaver somniferum HOM05D000593 ORTHO05D000562 1.4e-07 60.1 126 27.8
Ca_02614_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.9e-07 59.7 79 39.2
Medtr2g030885 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-07 59.7 112 33.9
PSO675G6516 Papaver somniferum HOM05D000593 ORTHO05D000562 1.9e-07 59.7 104 29.8
HanXRQChr11g0331001 Helianthus annuus HOM05D000593 ORTHO05D000562 2.4e-07 59.3 79 40.5
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-07 59.3 105 33.3
HanXRQChr02g0034801 Helianthus annuus HOM05D000593 ORTHO05D000562 3.2e-07 58.9 109 33.0
PSO591G0063 Papaver somniferum HOM05D000593 ORTHO05D000562 3.2e-07 58.9 120 27.5
PSO782G3412 Papaver somniferum HOM05D000593 ORTHO05D000562 3.2e-07 58.9 68 41.2
HanXRQChr17g0552941 Helianthus annuus HOM05D000593 ORTHO05D000562 4.1e-07 58.5 109 32.1
PSO541G4860 Papaver somniferum HOM05D000593 ORTHO05D000562 4.1e-07 58.5 109 29.4
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 4.1e-07 58.5 112 28.6
Ca_20174_v3 Cicer arietinum L. HOM05D000025 ORTHO05D000136 5.4e-07 58.2 72 40.3
PSO170G3669 Papaver somniferum HOM05D000593 ORTHO05D000562 5.4e-07 58.2 79 43.0
TPR.G27988 Trifolium pratense HOM05D000593 ORTHO05D000562 7.1e-07 57.8 91 38.5
HanXRQChr02g0049861 Helianthus annuus HOM05D000593 ORTHO05D000562 9.2e-07 57.4 81 37.0
Medtr2g105460 Medicago truncatula HOM05D003216 ORTHO05D004526 9.2e-07 57.4 103 33.0
Rhsim07G0193000 Rhododendron simsii HOM05D000593 ORTHO05D000562 9.2e-07 57.4 49 57.1
PSO541G3362 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-06 57.0 81 33.3
PSO801G0754 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-06 57.0 94 36.2
PSO063G1605 Papaver somniferum HOM05D000593 ORTHO05D000562 1.6e-06 56.6 49 51.0
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 2.1e-06 56.2 108 32.4
HanXRQChr13g0412781 Helianthus annuus HOM05D000593 ORTHO05D000562 2.1e-06 56.2 108 32.4
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 2.1e-06 56.2 108 32.4
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 2.1e-06 56.2 108 32.4
AUR62022257 Chenopodium quinoa HOM05D012566 ORTHO05D000562 2.7e-06 55.8 63 41.3
Ca_13605_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.7e-06 55.8 45 53.3
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.5e-06 55.5 64 42.2
Gohir.D02G153950 Gossypium hirsutum HOM05D000593 ORTHO05D000562 3.5e-06 55.5 115 29.6
Medtr8g465320 Medicago truncatula HOM05D000593 ORTHO05D000562 3.5e-06 55.5 85 35.3
TWI53G0239 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.5e-06 55.5 108 34.3
AUR62039874 Chenopodium quinoa HOM05D012566 ORTHO05D000562 4.6e-06 55.1 74 37.8
Ca_18101_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.6e-06 55.1 64 42.2
HanXRQChr00c1149g0578651 Helianthus annuus HOM05D000593 ORTHO05D000562 4.6e-06 55.1 83 36.1
HanXRQChr12g0382841 Helianthus annuus HOM05D003475 ORTHO05D000562 4.6e-06 55.1 73 39.7
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 4.6e-06 55.1 82 34.1
HanXRQChr17g0555641 Helianthus annuus HOM05D000593 ORTHO05D000562 7.8e-06 54.3 86 33.7
Medtr5g413325 Medicago truncatula HOM05D003216 ORTHO05D002268 7.8e-06 54.3 103 29.1
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 7.8e-06 54.3 79 38.0


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