Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0494691 Rosa chinensis HOM05D002399 ORTHO05D002479 9.5e-55 216.9 131 100.0
FAN19G0267 Fragaria x ananassa HOM05D002399 ORTHO05D002479 1.6e-38 162.9 124 82.3
FvH4_1g29240 Fragaria vesca HOM05D002399 ORTHO05D002479 6.2e-38 161.0 124 81.5
FAN28G2240 Fragaria x ananassa HOM05D002399 ORTHO05D002479 6.9e-37 157.5 124 81.5
FAN23G2931 Fragaria x ananassa HOM05D002399 ORTHO05D002479 1.5e-36 156.4 124 79.0
FAN26G0777 Fragaria x ananassa HOM05D002399 ORTHO05D002479 5.4e-34 147.9 122 77.9
Prupe.7G019800 Prunus persica HOM05D002399 ORTHO05D002479 4.0e-29 131.7 121 62.8
Dinv03031 Davidia involucrata HOM05D002399 ORTHO05D002479 3.7e-14 82.0 127 47.2
Atru.chr1.1379 Acer truncatum HOM05D002399 ORTHO05D002479 8.4e-11 70.9 132 41.7
CiPaw.09G052000 Carya illinoinensis HOM05D002399 ORTHO05D002479 1.1e-10 70.5 120 44.2
QL07p013773 Quercus lobata HOM05D002399 ORTHO05D002479 1.1e-10 70.5 127 45.7
TAR623G1667 Trochodendron aralioides HOM05D002399 ORTHO05D002479 3.2e-10 68.9 125 45.6
Dinv07097 Davidia involucrata HOM05D002399 ORTHO05D002479 4.2e-10 68.6 127 42.5
TWI53G0516 Tripterygium wilfordii HOM05D002399 ORTHO05D002479 5.5e-10 68.2 82 54.9
TAR633G2682 Trochodendron aralioides HOM05D002399 ORTHO05D002479 5.5e-10 68.2 117 43.6
Actinidia38201 Actinidia chinensis HOM05D002399 ORTHO05D002479 1.2e-09 67.0 127 40.2
Potri.016G029100 Populus trichocarpa HOM05D002399 ORTHO05D002479 1.6e-09 66.6 132 41.7
GSVIVG01025813001 Vitis vinifera HOM05D002399 ORTHO05D002479 2.1e-09 66.2 123 38.2
TWI74G0806 Tripterygium wilfordii HOM05D002399 ORTHO05D002479 3.5e-09 65.5 125 40.0
Duzib128G0668 Durio zibethinus HOM05D002399 ORTHO05D002479 7.9e-09 64.3 112 40.2
CSS0011739 Camellia sinensis var. sinensis HOM05D002399 ORTHO05D002479 1.3e-08 63.5 124 39.5
CAN.G959.19 Capsicum annuum HOM05D002399 ORTHO05D002479 2.3e-08 62.8 123 36.6
Gohir.A11G305700 Gossypium hirsutum HOM05D002399 ORTHO05D002479 5.1e-08 61.6 134 35.1
CANSAT64G2553 Cannabis sativa HOM05D002399 ORTHO05D002479 6.7e-08 61.2 125 42.4
Eucgr.K01680 Eucalyptus grandis HOM05D002399 ORTHO05D002479 6.7e-08 61.2 126 35.7
Lj1g0007902 Lotus japonicus HOM05D002399 ORTHO05D002479 8.7e-08 60.8 132 37.1
CsaV3_4G029230 Cucumis sativus L. HOM05D005318 ORTHO05D006791 1.1e-07 60.5 131 37.4
Nn2g14594 Nelumbo nucifera HOM05D002399 ORTHO05D002479 1.1e-07 60.5 124 37.9
Thecc.05G119200 Theobroma cacao HOM05D002399 ORTHO05D002479 1.1e-07 60.5 141 35.5
Glyma.19G125700 Glycine max HOM05D002399 ORTHO05D002479 1.5e-07 60.1 128 38.3
Nitab4.5_0000123g0260 Nicotiana tabacum HOM05D002399 ORTHO05D002479 2.5e-07 59.3 81 42.0
MELO3C019136.2 Cucumis melo HOM05D002399 ORTHO05D002479 3.3e-07 58.9 68 50.0
CiPaw.10G043800 Carya illinoinensis HOM05D002399 ORTHO05D002479 7.4e-07 57.8 77 50.6
ClCG04G005900 Citrullus lanatus HOM05D002399 ORTHO05D002479 9.7e-07 57.4 130 35.4
Manes.08G162300 Manihot esculenta HOM05D002399 ORTHO05D002479 1.3e-06 57.0 133 37.6
Gohir.D11G321100 Gossypium hirsutum HOM05D002399 ORTHO05D002479 1.6e-06 56.6 136 33.8
Solyc10g078160.2 Solanum lycopersicum HOM05D002399 ORTHO05D002479 1.6e-06 56.6 123 36.6
TWI77G0801 Tripterygium wilfordii HOM05D002399 ORTHO05D002479 1.6e-06 56.6 129 38.0
TWI74G1259 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 2.2e-06 56.2 55 54.5
Medtr7g088720 Medicago truncatula HOM05D002399 ORTHO05D002479 2.8e-06 55.8 129 36.4
Sopen10g028840 Solanum pennellii HOM05D002399 ORTHO05D002479 2.8e-06 55.8 123 36.6


User provided reference genes

Program Settings