Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0494501 Rosa chinensis HOM05D011213 ORTHO05D012867 6.7e-95 350.9 206 100.0
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 1.2e-46 190.7 205 63.9
FvH4_1g09982 Fragaria vesca HOM05D011213 ORTHO05D012867 3.6e-40 169.1 201 53.7
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 2.3e-34 149.8 126 64.3
FvH4_2g11355 Fragaria vesca HOM05D000017 ORTHO05D000013 3.6e-32 142.5 205 47.3
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 6.1e-32 141.7 202 52.0
FvH4_6g25413 Fragaria vesca HOM05D000017 ORTHO05D000013 1.7e-29 133.7 158 48.7
RcHm_v2.0_Chr1g0352521 Rosa chinensis HOM05D011213 ORTHO05D012867 7.0e-28 128.3 150 53.3
FvH4_6g39831 Fragaria vesca HOM05D000017 ORTHO05D000013 4.5e-27 125.6 123 56.1
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 1.3e-26 124.0 101 63.4
RcHm_v2.0_Chr6g0264981 Rosa chinensis HOM05D011213 ORTHO05D012867 8.6e-26 121.3 98 63.3
FvH4_3g20431 Fragaria vesca HOM05D000017 ORTHO05D000013 1.8e-23 113.6 108 54.6
FvH4_1g10352 Fragaria vesca HOM05D000017 ORTHO05D000013 5.2e-23 112.1 94 63.8
FAN08G1731 Fragaria x ananassa HOM05D008248 ORTHO05D012867 5.2e-23 112.1 156 48.7
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 1.2e-22 110.9 133 48.1
FAN17G1279 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.2e-22 110.9 118 50.8
FvH4_1g29132 Fragaria vesca HOM05D000017 ORTHO05D000013 1.5e-22 110.5 154 50.0
FAN23G1537 Fragaria x ananassa HOM05D011213 ORTHO05D012867 3.2e-20 102.8 201 44.3
FAN23G2842 Fragaria x ananassa HOM05D011213 ORTHO05D012867 3.2e-20 102.8 201 44.3
FAN03G1157 Fragaria x ananassa HOM05D008248 ORTHO05D029481 2.7e-19 99.8 98 61.2
FAN27G2637 Fragaria x ananassa HOM05D011213 ORTHO05D012867 9.5e-17 91.3 106 49.1
FvH4_6g31092 Fragaria vesca HOM05D000017 ORTHO05D000013 7.5e-14 81.6 151 39.7
FvH4_1g02991 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-13 80.9 204 40.7
FAN07G0949 Fragaria x ananassa HOM05D008248 ORTHO05D012867 1.9e-12 77.0 194 47.4
FvH4_4g33232 Fragaria vesca HOM05D000017 ORTHO05D000013 4.1e-12 75.9 79 46.8
FAN25G0130 Fragaria x ananassa HOM05D008248 ORTHO05D012867 5.4e-12 75.5 117 47.9
Prupe.8G015400 Prunus persica HOM05D011213 ORTHO05D012867 5.4e-12 75.5 120 35.0
RcHm_v2.0_Chr5g0049571 Rosa chinensis HOM05D000017 ORTHO05D000013 3.5e-11 72.8 49 71.4
FAN23G1189 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.7e-10 70.5 97 47.4
Medtr2g090645 Medicago truncatula HOM05D011213 ORTHO05D012867 1.9e-09 67.0 75 44.0
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-09 67.0 70 40.0
Prupe.1G164400 Prunus persica HOM05D008248 ORTHO05D012867 5.6e-09 65.5 161 34.8
FAN26G3064 Fragaria x ananassa HOM05D011213 ORTHO05D012867 9.5e-09 64.7 83 48.2
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.5e-09 64.7 82 37.8
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.5e-09 64.7 70 44.3
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.5e-09 64.7 70 44.3
Medtr2g048835 Medicago truncatula HOM05D000017 ORTHO05D000013 9.5e-09 64.7 77 41.6
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-08 64.3 70 42.9
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-08 63.5 70 44.3
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.1e-08 63.5 87 37.9
Ca_03485_v3 Cicer arietinum L. HOM05D008773 ORTHO05D010496 2.8e-08 63.2 69 44.9
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-08 63.2 115 33.9
Medtr3g436320 Medicago truncatula HOM05D000017 ORTHO05D010633 2.8e-08 63.2 81 40.7
Rhsim13G0199100 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.8e-08 63.2 71 43.7
Rhsim04G0159500 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.6e-08 62.8 71 42.3
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.7e-08 62.4 69 43.5
TPR.G28103 Trifolium pratense HOM05D000017 ORTHO05D000013 1.4e-07 60.8 76 38.2
ECA234G1768 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.8e-07 60.5 72 41.7
ECA233G4979 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.3e-07 60.1 71 42.3
Rhsim04G0080300 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.3e-07 60.1 70 38.6
Rhsim02G0197700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-07 59.7 116 35.3
FvH4_6g29311 Fragaria vesca HOM05D000017 ORTHO05D000013 4.0e-07 59.3 106 44.3
Medtr5g081480 Medicago truncatula HOM05D000017 ORTHO05D009934 4.0e-07 59.3 100 34.0
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-07 58.9 71 42.3
QL09p029670 Quercus lobata HOM05D000017 ORTHO05D000013 5.2e-07 58.9 105 34.3
QL01p000385 Quercus lobata HOM05D000017 ORTHO05D000013 6.8e-07 58.5 70 40.0
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.8e-07 58.5 111 33.3
RcHm_v2.0_Chr3g0464951 Rosa chinensis HOM05D000017 ORTHO05D000013 6.8e-07 58.5 73 43.8
Medtr6g462630 Medicago truncatula HOM05D000017 ORTHO05D000013 8.9e-07 58.2 73 42.5
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.9e-07 58.2 70 38.6
ECA233G2055 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-06 57.8 72 40.3
RcHm_v2.0_Chr5g0037961 Rosa chinensis HOM05D000017 ORTHO05D000013 1.2e-06 57.8 81 40.7
Ca_14918_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.5e-06 57.4 69 43.5
RcHm_v2.0_Chr6g0255251 Rosa chinensis HOM05D014743 ORTHO05D014641 1.5e-06 57.4 102 37.3
COL.COLO4_30198 Corchorus olitorius HOM05D000017 ORTHO05D000013 2.6e-06 56.6 90 36.7
ECA238G0864 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.4e-06 56.2 113 32.7
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.4e-06 56.2 108 32.4
Sed0005941 Sechium edule HOM05D000017 ORTHO05D000013 3.4e-06 56.2 70 38.6
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-06 55.8 71 40.8
RcHm_v2.0_Chr5g0045201 Rosa chinensis HOM05D014743 ORTHO05D014641 4.4e-06 55.8 102 36.3
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-06 55.5 70 38.6
RcHm_v2.0_Chr5g0080361 Rosa chinensis HOM05D000017 ORTHO05D000013 5.8e-06 55.5 132 31.8
ECA236G1696 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.5e-06 55.1 72 41.7
ECA247G2865 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.5e-06 55.1 92 40.2
FAN08G0624 Fragaria x ananassa HOM05D011213 ORTHO05D012867 7.5e-06 55.1 173 39.9
FvH4_7g07733 Fragaria vesca HOM05D008248 ORTHO05D012867 9.9e-06 54.7 97 44.3
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.9e-06 54.7 71 40.8
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.9e-06 54.7 102 34.3


User provided reference genes

Program Settings