Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0492851 Rosa chinensis HOM05D023878 ORTHO05D343285 6.3e-112 407.5 218 100.0
RcHm_v2.0_Chr3g0492741 Rosa chinensis HOM05D023878 ORTHO05D341112 5.6e-84 314.7 188 91.0
RcHm_v2.0_Chr3g0492941 Rosa chinensis HOM05D023878 ORTHO05D342523 3.0e-21 106.3 198 34.3
RcHm_v2.0_Chr2g0148231 Rosa chinensis HOM05D005210 ORTHO05D010080 8.2e-19 98.2 200 34.5
RcHm_v2.0_Chr3g0492811 Rosa chinensis HOM05D023878 ORTHO05D348104 2.2e-08 63.5 118 36.4
Solyc02g068500.3 Solanum lycopersicum HOM05D000247 ORTHO05D008926 1.6e-06 57.4 105 30.5
Sopen02g017640 Solanum pennellii HOM05D000247 ORTHO05D008926 1.6e-06 57.4 105 30.5
arahy.Tifrunner.gnm1.ann1.LMJ0T6 Arachis hypogaea HOM05D000247 ORTHO05D008926 2.1e-06 57.0 188 24.5
arahy.Tifrunner.gnm1.ann1.N4QHWM Arachis hypogaea HOM05D000247 ORTHO05D008926 2.1e-06 57.0 188 24.5
unitig_748.g8074 Utricularia gibba HOM05D000247 ORTHO05D008926 2.1e-06 57.0 105 32.4
Glyma.08G087100 Glycine max HOM05D000247 ORTHO05D008926 2.7e-06 56.6 105 29.5
GSVIVG01012129001 Vitis vinifera HOM05D000247 ORTHO05D008926 3.6e-06 56.2 105 29.5
GSVIVG01012130001 Vitis vinifera HOM05D000247 ORTHO05D008926 3.6e-06 56.2 105 29.5
Nn7g38276 Nelumbo nucifera HOM05D000247 ORTHO05D008926 6.1e-06 55.5 105 29.5
RcHm_v2.0_Chr3g0492821 Rosa chinensis HOM05D023878 ORTHO05D342039 6.1e-06 55.5 60 40.0
Glyma.05G132600 Glycine max HOM05D000247 ORTHO05D008926 8.0e-06 55.1 105 27.6
PSO541G6344 Papaver somniferum HOM05D000247 ORTHO05D008926 8.0e-06 55.1 103 30.1
Psat7g088680 Pisum sativum HOM05D000247 ORTHO05D008926 8.0e-06 55.1 137 27.7


User provided reference genes

Program Settings