Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0492741 Rosa chinensis HOM05D023878 ORTHO05D341112 1.3e-92 343.2 190 100.0
RcHm_v2.0_Chr3g0492851 Rosa chinensis HOM05D023878 ORTHO05D343285 3.7e-84 315.1 188 91.0
RcHm_v2.0_Chr3g0492941 Rosa chinensis HOM05D023878 ORTHO05D342523 9.7e-16 87.8 140 34.3
RcHm_v2.0_Chr2g0148231 Rosa chinensis HOM05D005210 ORTHO05D010080 2.6e-13 79.7 127 36.2
RcHm_v2.0_Chr3g0492811 Rosa chinensis HOM05D023878 ORTHO05D348104 5.7e-08 62.0 117 35.9
Solyc02g068500.3 Solanum lycopersicum HOM05D000247 ORTHO05D008926 7.4e-08 61.6 107 31.8
Sopen02g017640 Solanum pennellii HOM05D000247 ORTHO05D008926 7.4e-08 61.6 107 31.8
unitig_748.g8074 Utricularia gibba HOM05D000247 ORTHO05D008926 9.7e-08 61.2 107 33.6
Glyma.08G087100 Glycine max HOM05D000247 ORTHO05D008926 3.7e-07 59.3 106 29.2
GSVIVG01012129001 Vitis vinifera HOM05D000247 ORTHO05D008926 6.3e-07 58.5 106 29.2
GSVIVG01012130001 Vitis vinifera HOM05D000247 ORTHO05D008926 6.3e-07 58.5 106 29.2
Glyma.05G132600 Glycine max HOM05D000247 ORTHO05D008926 1.1e-06 57.8 106 27.4
PGSC0003DMG402010449 Solanum tuberosum HOM05D000247 ORTHO05D008926 1.1e-06 57.8 107 29.0
arahy.Tifrunner.gnm1.ann1.LMJ0T6 Arachis hypogaea HOM05D000247 ORTHO05D008926 1.4e-06 57.4 106 27.4
arahy.Tifrunner.gnm1.ann1.N4QHWM Arachis hypogaea HOM05D000247 ORTHO05D008926 1.4e-06 57.4 106 27.4
Cc09_g05440 Coffea canephora HOM05D000247 ORTHO05D008926 1.4e-06 57.4 102 31.4
MSTRG.7604 Avicennia marina HOM05D000247 ORTHO05D008926 1.8e-06 57.0 107 31.8
Eucgr.D00028 Eucalyptus grandis HOM05D000247 ORTHO05D008926 1.8e-06 57.0 107 30.8
TAR627G0960 Trochodendron aralioides HOM05D000247 ORTHO05D008926 2.4e-06 56.6 107 29.0
CAN.G1299.10 Capsicum annuum HOM05D000247 ORTHO05D008926 3.1e-06 56.2 107 29.9
Nn7g38276 Nelumbo nucifera HOM05D000247 ORTHO05D008926 4.1e-06 55.8 107 28.0
Nitab4.5_0000443g0110 Nicotiana tabacum HOM05D000247 ORTHO05D008926 4.1e-06 55.8 107 29.9
Lj4g0027483 Lotus japonicus HOM05D000247 ORTHO05D008926 5.3e-06 55.5 106 28.3
Lalb_Chr07g0188361 Lupinus albus HOM05D000247 ORTHO05D008926 5.3e-06 55.5 106 27.4
Medtr4g094690 Medicago truncatula HOM05D000247 ORTHO05D008926 5.3e-06 55.5 106 28.3
Psat7g088680 Pisum sativum HOM05D000247 ORTHO05D008926 5.3e-06 55.5 106 28.3
Migut.M02000 Erythranthe guttata HOM05D000247 ORTHO05D008926 7.0e-06 55.1 107 30.8
TPR.G31242 Trifolium pratense HOM05D000247 ORTHO05D008926 9.1e-06 54.7 106 28.3


User provided reference genes

Program Settings