Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0491121 Rosa chinensis HOM05D000655 ORTHO05D343596 1.1e-41 172.9 91 100.0
RcHm_v2.0_Chr3g0491141 Rosa chinensis HOM05D000655 ORTHO05D001166 2.9e-10 68.6 38 89.5
Ciclev10012358m.g Citrus clementina HOM05D000655 ORTHO05D001166 3.2e-09 65.1 38 78.9
FvH4_1g30260 Fragaria vesca HOM05D000655 ORTHO05D001166 3.6e-08 61.6 38 81.6
FAN19G2469 Fragaria x ananassa HOM05D000655 ORTHO05D001166 3.6e-08 61.6 38 81.6
FAN23G1615 Fragaria x ananassa HOM05D000655 ORTHO05D001166 3.6e-08 61.6 38 81.6
FAN26G1602 Fragaria x ananassa HOM05D000655 ORTHO05D001166 3.6e-08 61.6 38 81.6
MD09G1271000 Malus domestica HOM05D000655 ORTHO05D001166 6.1e-08 60.8 38 68.4
Haze_14275 Corylus avellana HOM05D000655 ORTHO05D001166 1.0e-07 60.1 38 78.9
Prupe.3G017500 Prunus persica HOM05D000655 ORTHO05D001166 1.0e-07 60.1 38 71.1
MD17G1269100 Malus domestica HOM05D000655 ORTHO05D001166 1.4e-07 59.7 38 68.4
TWI74G1224 Tripterygium wilfordii HOM05D000655 ORTHO05D001166 1.8e-07 59.3 38 73.7
Potri.004G086000 Populus trichocarpa HOM05D000655 ORTHO05D001166 2.3e-07 58.9 38 73.7
Atru.chr1.1992 Acer truncatum HOM05D000655 ORTHO05D001166 8.8e-07 57.0 41 68.3
Gohir.A07G097001 Gossypium hirsutum HOM05D000655 ORTHO05D001166 1.1e-06 56.6 38 71.1
CSS0017853 Camellia sinensis var. sinensis HOM05D000655 ORTHO05D001166 1.5e-06 56.2 35 80.0
CAN.G222.40 Capsicum annuum HOM05D000655 ORTHO05D001166 1.5e-06 56.2 39 66.7
Actinidia06489 Actinidia chinensis HOM05D000655 ORTHO05D001166 2.6e-06 55.5 37 70.3
Cpa.g.sc116.66 Carica papaya HOM05D000655 ORTHO05D001166 2.6e-06 55.5 38 71.1
COL.COLO4_13430 Corchorus olitorius HOM05D000655 ORTHO05D001166 3.3e-06 55.1 38 68.4
ECA233G0304 Erigeron canadensis HOM05D000655 ORTHO05D001166 3.3e-06 55.1 35 74.3
Migut.H02254 Erythranthe guttata HOM05D000655 ORTHO05D001166 3.3e-06 55.1 37 70.3
Gohir.D07G101500 Gossypium hirsutum HOM05D000655 ORTHO05D001166 3.3e-06 55.1 38 68.4
Gorai.001G109400 Gossypium raimondii HOM05D000655 ORTHO05D001166 3.3e-06 55.1 38 68.4
CiPaw.03G073000 Carya illinoinensis HOM05D000655 ORTHO05D001166 4.4e-06 54.7 33 81.8
Manes.02G077700 Manihot esculenta HOM05D000655 ORTHO05D001166 4.4e-06 54.7 34 79.4
Thecc.04G054600 Theobroma cacao HOM05D000655 ORTHO05D001166 4.4e-06 54.7 38 68.4
Cc07_g13320 Coffea canephora HOM05D000655 ORTHO05D001166 5.7e-06 54.3 37 67.6
Peaxi162Scf00562g00096 Petunia axillaris HOM05D000655 ORTHO05D001166 5.7e-06 54.3 39 64.1
Solyc05g051270.3 Solanum lycopersicum HOM05D000655 ORTHO05D001166 5.7e-06 54.3 34 73.5
ClCG03G008780 Citrullus lanatus HOM05D000655 ORTHO05D001166 7.4e-06 53.9 38 68.4
Nitab4.5_0004679g0080 Nicotiana tabacum HOM05D000655 ORTHO05D001166 7.4e-06 53.9 34 70.6
DCAR_011631 Daucus carota HOM05D000655 ORTHO05D001166 9.7e-06 53.5 37 67.6
Dinv19042 Davidia involucrata HOM05D000655 ORTHO05D001166 9.7e-06 53.5 37 70.3
QL02p058498 Quercus lobata HOM05D000655 ORTHO05D001166 9.7e-06 53.5 34 76.5
QL10p014209 Quercus lobata HOM05D000655 ORTHO05D001166 9.7e-06 53.5 34 76.5
Rhsim10G0178100 Rhododendron simsii HOM05D000655 ORTHO05D001166 9.7e-06 53.5 37 70.3
GSVIVG01030681001 Vitis vinifera HOM05D000655 ORTHO05D001166 9.7e-06 53.5 37 67.6


User provided reference genes

Program Settings