Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0488241 Rosa chinensis HOM05D006872 ORTHO05D006261 9.5e-32 139.4 64 100.0
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 5.8e-13 77.0 53 69.8
ClCG10G018510 Citrullus lanatus HOM05D006872 ORTHO05D006261 4.9e-12 73.9 50 68.0
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 4.9e-12 73.9 50 68.0
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 4.9e-12 73.9 50 68.0
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 7.0e-11 70.1 57 63.2
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 7.0e-11 70.1 57 63.2
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 7.0e-11 70.1 57 63.2
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 2.0e-10 68.6 52 65.4
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 4.6e-10 67.4 55 63.6
FAN09G3456 Fragaria x ananassa HOM05D006872 ORTHO05D006261 1.3e-09 65.9 51 62.7
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 1.5e-08 62.4 45 62.2
Sed0014477 Sechium edule HOM05D006872 ORTHO05D006261 3.3e-08 61.2 49 61.2
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 4.3e-08 60.8 58 53.4
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 5.6e-08 60.5 60 56.7
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 5.6e-08 60.5 49 59.2
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 7.3e-08 60.1 57 54.4
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 7.3e-08 60.1 57 54.4
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 9.5e-08 59.7 45 57.8
QL07p037475 Quercus lobata HOM05D006872 ORTHO05D006261 9.5e-08 59.7 60 51.7
CiPaw.09G018900 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.6e-07 58.9 54 57.4
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 1.6e-07 58.9 65 49.2
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 2.1e-07 58.5 58 55.2
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 2.8e-07 58.2 57 52.6
Lalb_Chr20g0111461 Lupinus albus HOM05D006872 ORTHO05D006261 3.6e-07 57.8 55 50.9
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 3.6e-07 57.8 60 50.0
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 8.1e-07 56.6 59 54.2
Ca_09043_v3 Cicer arietinum L. HOM05D006872 ORTHO05D006261 1.4e-06 55.8 56 55.4
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 1.4e-06 55.8 58 51.7
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 1.8e-06 55.5 58 46.6
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 1.8e-06 55.5 52 51.9
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 3.1e-06 54.7 58 51.7
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 4.0e-06 54.3 45 55.6
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 4.0e-06 54.3 59 49.2
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 5.2e-06 53.9 56 48.2
Duzib106G0826 Durio zibethinus HOM05D006872 ORTHO05D006261 5.2e-06 53.9 45 55.6


User provided reference genes

Program Settings