Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0486691 Rosa chinensis HOM05D004141 ORTHO05D347679 2.3e-24 114.8 59 100.0
RcHm_v2.0_Chr4g0402621 Rosa chinensis HOM05D004141 ORTHO05D344211 8.7e-24 112.8 58 100.0
FAN21G2932 Fragaria x ananassa HOM05D004141 ORTHO05D005416 3.7e-14 80.9 55 78.2
RcHm_v2.0_Chr5g0030771 Rosa chinensis HOM05D004141 ORTHO05D005416 1.9e-10 68.6 38 92.1
MD11G1264500 Malus domestica HOM05D004141 ORTHO05D005416 4.7e-09 63.9 38 86.8
Prupe.4G241400 Prunus persica HOM05D004141 ORTHO05D005416 4.7e-09 63.9 38 86.8
Dinv18368 Davidia involucrata HOM05D004141 ORTHO05D005416 2.3e-08 61.6 38 81.6
Hma1.2p1_1016F.1_g248060 Hydrangea macrophylla HOM05D004141 ORTHO05D005416 2.3e-08 61.6 38 81.6
Actinidia18802 Actinidia chinensis HOM05D004141 ORTHO05D005416 3.0e-08 61.2 38 73.7
Nn7g36869 Nelumbo nucifera HOM05D004141 ORTHO05D005416 3.0e-08 61.2 38 78.9
TAR627G0990 Trochodendron aralioides HOM05D004141 ORTHO05D005416 8.8e-08 59.7 38 78.9
Prupe.5G052700 Prunus persica HOM05D004141 ORTHO05D005416 1.1e-07 59.3 38 81.6
Actinidia35211 Actinidia chinensis HOM05D004141 ORTHO05D005416 1.5e-07 58.9 38 78.9
CSS0023821 Camellia sinensis var. sinensis HOM05D004141 ORTHO05D005416 1.5e-07 58.9 38 76.3
FAN16G3678 Fragaria x ananassa HOM05D004141 ORTHO05D005416 2.0e-07 58.5 42 78.6
TAR629G0569 Trochodendron aralioides HOM05D004141 ORTHO05D005416 2.0e-07 58.5 38 78.9
Dinv15000 Davidia involucrata HOM05D004141 ORTHO05D005416 3.3e-07 57.8 38 78.9
MBI14_g32936_MAGBIO Magnolia biondii HOM05D004141 ORTHO05D005416 7.4e-07 56.6 38 71.1
QL06p023676 Quercus lobata HOM05D004141 ORTHO05D005416 7.4e-07 56.6 38 76.3
Atru.chr2.2126 Acer truncatum HOM05D004141 ORTHO05D005416 1.3e-06 55.8 38 71.1
FvH4_3g18220 Fragaria vesca HOM05D004141 ORTHO05D005416 2.2e-06 55.1 38 81.6
Gohir.A01G053700 Gossypium hirsutum HOM05D004141 ORTHO05D005416 2.2e-06 55.1 38 71.1
Gohir.D01G042710 Gossypium hirsutum HOM05D004141 ORTHO05D005416 2.2e-06 55.1 38 71.1
Gorai.002G054000 Gossypium raimondii HOM05D004141 ORTHO05D005416 2.2e-06 55.1 38 71.1
FAN11G2786 Fragaria x ananassa HOM05D004141 ORTHO05D005416 2.8e-06 54.7 41 75.6
Atru.chr3.1550 Acer truncatum HOM05D004141 ORTHO05D005416 3.7e-06 54.3 38 68.4
Duzib213G0637 Durio zibethinus HOM05D004141 ORTHO05D005416 4.8e-06 53.9 38 71.1
Thecc.07G117900 Theobroma cacao HOM05D004141 ORTHO05D005416 6.3e-06 53.5 38 68.4
Cfa017272 Carpinus fangiana HOM05D004141 ORTHO05D005416 8.2e-06 53.1 38 73.7


User provided reference genes

Program Settings