Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.5e-107 392.1 197 100.0
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.0e-86 320.9 202 84.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.0e-84 315.5 202 83.7
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.9e-83 312.8 200 83.5
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.6e-82 309.7 198 83.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.7e-63 246.5 159 83.0
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.9e-59 233.0 184 69.6
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.2e-53 213.8 198 66.2
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.3e-52 210.3 195 61.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 3.3e-51 205.7 172 62.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.1e-50 203.0 197 59.4
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.8e-49 199.9 183 61.7
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 3.1e-49 199.1 185 59.5
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.0e-47 194.1 199 56.3
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 3.8e-47 192.2 170 61.2
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 6.5e-47 191.4 176 61.4
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 4.2e-46 188.7 160 60.6
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.2e-46 188.7 183 59.6
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.6e-45 186.8 196 57.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.5e-45 185.7 185 57.3
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.5e-45 185.7 185 57.3
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 7.9e-45 184.5 185 56.8
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.0e-44 184.1 179 59.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.0e-44 184.1 191 56.5
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 5.1e-44 181.8 163 60.7
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 6.7e-44 181.4 172 59.3
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 8.7e-44 181.0 161 61.5
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.9e-43 179.9 186 57.0
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.5e-43 179.5 176 55.7
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 3.3e-43 179.1 179 56.4
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 3.3e-43 179.1 180 58.3
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.3e-43 179.1 159 59.1
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 5.7e-43 178.3 156 64.1
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 7.4e-43 177.9 189 54.5
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 7.4e-43 177.9 172 59.3
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 9.6e-43 177.6 196 52.0
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.6e-42 176.8 161 60.9
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 2.8e-42 176.0 183 55.7
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.7e-42 175.6 179 55.9
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 6.2e-42 174.9 181 55.2
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 6.2e-42 174.9 156 61.5
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 8.2e-42 174.5 160 60.0
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 8.2e-42 174.5 190 52.1
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.4e-41 173.7 180 56.7
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.4e-41 173.7 179 54.7
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 2.4e-41 172.9 169 56.2
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 5.3e-41 171.8 179 51.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 6.9e-41 171.4 179 54.7
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 9.0e-41 171.0 185 56.8
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 9.0e-41 171.0 160 60.6
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.2e-40 170.6 188 53.2
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.2e-40 170.6 156 59.6
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.5e-40 170.2 161 54.7
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.4e-40 169.1 170 55.3
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 7.6e-40 167.9 160 58.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.0e-39 167.5 154 55.2
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.0e-39 167.5 179 53.6
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.0e-39 167.5 163 56.4
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.3e-39 167.2 185 50.3
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.3e-39 167.2 180 53.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.9e-39 166.0 185 49.2
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 3.8e-39 165.6 177 51.4
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 5.0e-39 165.2 165 57.0
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 6.5e-39 164.9 158 58.2
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 6.5e-39 164.9 177 55.4
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 8.4e-39 164.5 158 58.2
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.4e-38 163.7 157 56.1
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.4e-38 163.7 181 50.8
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.5e-38 162.9 181 50.8
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 4.2e-38 162.2 178 56.2
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.2e-37 160.6 163 55.2
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 1.6e-37 160.2 141 58.9
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.7e-37 159.5 154 55.2
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 6.1e-37 158.3 156 54.5
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 6.1e-37 158.3 145 57.2
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.9e-37 157.9 180 50.0
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.9e-37 157.9 180 50.0
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.3e-36 157.1 156 55.1
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.8e-36 156.8 163 54.6
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 3.9e-36 155.6 157 52.2
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 3.9e-36 155.6 145 56.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 6.7e-36 154.8 155 52.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 6.7e-36 154.8 155 52.3
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 8.7e-36 154.5 163 54.0
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 2.5e-35 152.9 209 45.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.5e-35 152.9 198 46.0
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 3.3e-35 152.5 148 59.5
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 9.7e-35 151.0 185 48.6
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 9.7e-35 151.0 155 51.0
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 9.7e-35 151.0 195 49.7
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.2e-34 149.8 183 47.0
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.7e-34 149.1 158 54.4
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.8e-34 148.7 177 49.7
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 8.2e-34 147.9 154 50.6
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 8.2e-34 147.9 154 50.6
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.4e-33 147.1 182 48.9
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.9e-33 144.8 130 59.2
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 9.0e-33 144.4 185 49.7
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.7e-31 140.2 145 56.6
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 1.4e-30 137.1 119 63.0
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.1e-29 133.3 123 56.9
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 7.9e-29 131.3 123 57.7
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.7e-26 122.5 115 56.5
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.4e-25 120.6 75 81.3
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.3e-25 118.6 116 54.3
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 4.5e-24 115.5 170 43.5
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.1e-22 110.9 110 53.6
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 5.7e-19 98.6 72 61.1
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.9e-12 75.9 86 47.7
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.5e-11 73.9 168 32.1
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.6e-11 73.2 84 53.6
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.4e-09 67.4 142 34.5


User provided reference genes

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