Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 7.8e-203 710.3 372 100.0
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.2e-171 606.7 354 87.3
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 7.9e-171 604.0 354 87.3
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.8e-168 594.7 354 85.9
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.0e-167 591.7 354 85.9
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.2e-131 473.8 354 68.1
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 5.5e-124 448.4 350 66.6
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 5.5e-124 448.4 350 66.6
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 1.2e-115 420.6 354 59.3
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 1.8e-114 416.8 354 59.3
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 1.5e-113 413.7 353 60.3
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 5.7e-113 411.8 352 60.5
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 1.3e-112 410.6 353 61.2
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.1e-111 407.5 348 60.3
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.1e-111 407.5 354 58.5
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 1.2e-110 404.1 349 58.7
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 1.6e-110 403.7 349 60.7
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 4.5e-110 402.1 347 59.9
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 7.8e-110 401.4 355 60.8
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 1.0e-109 401.0 348 57.8
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 1.7e-109 400.2 357 60.5
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 2.9e-109 399.4 351 57.3
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 1.5e-108 397.1 352 60.2
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.3e-108 396.0 352 57.1
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 4.3e-108 395.6 352 57.1
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 2.1e-107 393.3 348 55.7
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 2.1e-107 393.3 348 57.5
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 2.8e-107 392.9 351 58.1
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 2.8e-107 392.9 349 59.3
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 6.1e-107 391.7 352 56.8
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 8.0e-107 391.3 348 56.6
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 8.0e-107 391.3 356 57.3
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.4e-106 390.6 348 58.3
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.8e-106 390.2 352 57.7
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 4.0e-106 389.0 348 58.0
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 2.0e-105 386.7 351 58.1
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 2.0e-102 376.7 350 57.1
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 2.7e-102 376.3 352 55.1
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 4.6e-102 375.6 352 55.4
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 7.8e-102 374.8 352 54.8
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 1.3e-101 374.0 351 56.1
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 3.9e-101 372.5 348 54.0
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 3.9e-101 372.5 353 57.5
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 5.0e-101 372.1 356 53.9
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 6.6e-101 371.7 352 54.5
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 1.1e-100 370.9 352 53.7
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 1.1e-100 370.9 352 54.3
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 4.3e-100 369.0 352 54.8
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 7.3e-100 368.2 350 56.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 1.2e-99 367.5 348 55.5
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 1.2e-99 367.5 357 53.5
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 1.6e-99 367.1 361 52.1
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 2.1e-99 366.7 352 54.3
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 1.4e-98 364.0 352 54.0
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.4e-98 364.0 352 52.8
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 1.8e-98 363.6 349 52.7
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 3.1e-98 362.8 350 54.3
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.5e-97 360.5 361 51.2
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 2.0e-97 360.1 347 54.8
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 2.6e-97 359.8 357 52.9
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.3e-96 357.5 348 53.4
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 8.3e-96 354.8 357 51.3
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.1e-95 354.4 351 53.3
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 3.2e-95 352.8 352 53.4
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 3.2e-95 352.8 357 52.1
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 3.0e-93 346.3 302 57.3
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 9.5e-92 341.3 378 49.7
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 9.5e-92 341.3 351 52.4
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.2e-91 340.9 351 51.9
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 2.8e-91 339.7 350 52.0
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.8e-91 339.7 356 48.6
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 3.6e-91 339.3 351 52.1
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 4.7e-91 339.0 356 48.9
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 8.1e-91 338.2 263 71.5
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 1.5e-89 334.0 353 49.9
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 2.0e-89 333.6 352 51.4
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 5.8e-89 332.0 352 52.0
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 6.0e-86 322.0 384 44.8
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 3.9e-85 319.3 365 46.8
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 6.6e-85 318.5 354 48.9
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 4.3e-84 315.8 357 51.0
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 4.7e-83 312.4 350 47.4
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.5e-81 307.4 335 49.9
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 7.6e-81 305.1 351 47.3
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.7e-80 303.9 330 50.0
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 3.5e-78 296.2 280 52.9
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 7.8e-78 295.0 267 58.1
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 3.8e-72 276.2 355 43.9
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 1.2e-70 271.2 268 55.2
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 3.8e-64 249.6 336 39.6
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.1e-63 248.1 248 54.0
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.3e-61 241.1 356 40.2
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 1.6e-59 234.2 325 39.7
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 6.2e-59 232.3 328 43.9
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.2e-57 228.0 209 57.4
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 8.4e-56 221.9 364 35.2
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 5.1e-53 212.6 321 40.2
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 1.5e-52 211.1 205 49.8
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 1.6e-51 207.6 214 50.0
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 5.5e-47 192.6 194 50.5
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 8.8e-29 132.1 203 38.4
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 1.3e-27 128.3 146 53.4
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 2.0e-25 120.9 85 65.9
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 7.7e-17 92.4 65 63.1
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.0e-16 92.0 109 44.0
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 1.7e-16 91.3 205 30.2
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.7e-14 84.0 70 58.6
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.7e-14 84.0 55 63.6
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.6e-06 58.2 36 66.7


User provided reference genes

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