Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 3.7e-160 568.2 285 100.0
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 7.9e-155 550.4 282 98.2
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 5.7e-153 544.3 304 91.8
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 2.2e-149 532.3 282 94.7
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.7e-144 516.2 301 88.0
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 2.8e-144 515.4 284 93.0
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 2.7e-139 498.8 282 86.9
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.6e-137 492.3 299 84.9
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 1.6e-134 483.0 282 85.8
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.0e-134 482.6 284 85.2
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 3.5e-134 481.9 284 85.2
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 7.7e-134 480.7 282 85.1
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 1.7e-133 479.6 283 83.4
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.1e-132 476.9 282 83.7
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.5e-132 476.5 283 84.8
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 3.2e-132 475.3 283 83.0
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 1.6e-131 473.0 284 83.8
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 4.7e-131 471.5 283 84.1
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 6.7e-130 467.6 284 81.7
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 6.7e-130 467.6 284 82.0
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 8.8e-130 467.2 284 81.7
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.2e-129 466.8 284 82.7
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.5e-129 466.5 286 81.8
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.5e-129 466.5 284 81.0
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.5e-129 466.5 282 81.6
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 2.6e-129 465.7 284 81.0
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 3.3e-129 465.3 284 80.6
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 3.3e-129 465.3 286 80.8
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.7e-128 463.0 282 81.2
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 2.8e-128 462.2 291 79.7
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 8.2e-128 460.7 293 78.8
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 2.4e-127 459.1 291 79.4
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 2.4e-127 459.1 282 80.9
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 3.1e-127 458.8 284 80.6
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 3.1e-127 458.8 282 79.8
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 5.3e-127 458.0 287 79.8
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 7.0e-127 457.6 282 79.1
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 7.0e-127 457.6 298 78.9
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 1.2e-126 456.8 295 77.6
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 1.2e-126 456.8 283 78.4
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 1.6e-126 456.4 281 80.4
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 3.5e-126 455.3 284 78.2
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 5.9e-126 454.5 282 79.1
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.7e-125 453.0 281 79.0
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 1.7e-125 453.0 281 78.6
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 2.2e-125 452.6 284 79.6
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 3.8e-125 451.8 284 76.8
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 5.0e-125 451.4 282 79.1
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.1e-124 450.3 284 78.9
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 1.1e-124 450.3 284 78.5
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.5e-124 449.9 285 76.5
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 7.2e-124 447.6 284 77.8
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 2.7e-123 445.7 287 77.4
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 4.7e-123 444.9 282 77.3
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 8.0e-123 444.1 282 79.8
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 8.0e-123 444.1 287 77.7
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 8.0e-123 444.1 320 71.6
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.0e-122 443.7 287 77.4
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 1.8e-122 443.0 282 78.4
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.3e-122 442.6 283 76.7
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 3.0e-122 442.2 284 77.1
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.0e-122 441.8 287 77.4
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 6.8e-122 441.0 282 76.6
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 8.8e-122 440.7 282 78.7
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 8.8e-122 440.7 307 72.6
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 8.8e-122 440.7 288 76.4
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.5e-121 439.9 320 70.0
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 9.8e-121 437.2 284 77.1
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.3e-120 436.8 284 75.0
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.8e-120 435.6 286 75.9
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 4.8e-120 434.9 277 75.1
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 4.8e-120 434.9 283 74.2
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 8.3e-120 434.1 285 76.1
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 1.1e-119 433.7 284 76.4
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.4e-119 433.3 284 76.8
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.4e-119 433.3 284 76.1
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 4.1e-119 431.8 287 75.3
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 5.4e-119 431.4 283 73.5
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 7.0e-119 431.0 284 75.7
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 2.7e-118 429.1 285 75.4
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 3.5e-118 428.7 284 75.4
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.5e-118 428.7 259 84.6
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 5.9e-118 427.9 284 74.6
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 1.0e-117 427.2 284 75.0
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 1.3e-117 426.8 283 74.2
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 2.9e-117 425.6 285 77.2
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 3.8e-117 425.2 284 74.6
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 1.1e-116 423.7 298 71.5
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.5e-116 423.3 287 73.9
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 5.5e-116 421.4 285 74.0
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 5.5e-116 421.4 285 74.0
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 2.1e-115 419.5 284 73.2
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.8e-115 419.1 295 71.2
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 2.8e-115 419.1 281 73.7
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 8.0e-115 417.5 293 71.3
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 2.0e-113 412.9 286 73.4
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 2.6e-113 412.5 283 70.7
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 3.1e-111 405.6 349 61.3
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 4.1e-111 405.2 243 82.3
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 2.7e-110 402.5 284 71.5
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.6e-107 392.1 282 72.3
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 6.8e-106 387.9 232 82.3
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 3.7e-104 382.1 260 73.1
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 6.4e-104 381.3 232 81.0
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 1.4e-103 380.2 219 84.5
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 9.2e-95 350.9 291 61.2
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 2.1e-94 349.7 289 60.9
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 5.0e-93 345.1 285 64.2
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 1.2e-89 334.0 301 55.8
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 3.7e-88 328.9 282 62.4
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 1.1e-87 327.4 195 82.6
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 1.0e-85 320.9 233 68.7
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.5e-84 317.0 286 60.5
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 6.2e-83 311.6 275 58.2
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 2.4e-79 299.7 177 83.6
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.7e-78 296.2 198 77.8
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 3.0e-77 292.7 176 81.8
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 3.9e-77 292.4 288 56.9
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 1.5e-76 290.4 284 57.4
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 4.3e-76 288.9 291 53.3
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.3e-76 288.9 197 77.2
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 9.6e-68 261.2 181 72.4
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 8.1e-67 258.1 198 69.7
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 5.8e-65 251.9 180 71.1
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 7.1e-63 245.0 291 49.5
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 7.1e-63 245.0 165 75.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 3.9e-61 239.2 313 40.3
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.0e-57 226.9 193 62.7
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 1.2e-54 217.6 305 41.3
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 2.8e-51 206.5 318 39.6
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.8e-48 196.1 121 75.2
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 7.1e-47 191.8 283 36.7
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 1.8e-45 187.2 101 90.1
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 4.8e-43 179.1 104 82.7
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 6.3e-43 178.7 243 41.6
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 5.9e-41 172.2 101 77.2
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.9e-39 167.2 101 75.2
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 5.5e-39 165.6 335 33.4
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.9e-37 159.5 129 62.8
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.5e-36 157.5 122 65.6
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 5.5e-31 139.0 96 74.0
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 2.0e-28 130.6 182 46.7
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 1.2e-25 121.3 87 69.0
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 1.3e-24 117.9 70 78.6
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 1.2e-22 111.3 93 61.3
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 4.8e-19 99.4 101 56.4
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.5e-15 85.9 44 95.5
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.6e-14 84.3 63 61.9
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 2.6e-12 77.0 60 63.3


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