Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0482681 Rosa chinensis HOM05D000092 ORTHO05D348660 9.1e-40 166.4 81 100.0
RcHm_v2.0_Chr4g0396311 Rosa chinensis HOM05D000092 ORTHO05D000042 8.3e-09 63.5 61 57.4
RcHm_v2.0_Chr4g0398211 Rosa chinensis HOM05D000092 ORTHO05D000042 2.1e-07 58.9 62 53.2
MD11G1203100 Malus domestica HOM05D000092 ORTHO05D000042 7.8e-07 57.0 61 55.7
RcHm_v2.0_Chr4g0397841 Rosa chinensis HOM05D000092 ORTHO05D000042 7.8e-07 57.0 61 52.5
RcHm_v2.0_Chr4g0408401 Rosa chinensis HOM05D000092 ORTHO05D000042 7.8e-07 57.0 69 47.8
RcHm_v2.0_Chr4g0397781 Rosa chinensis HOM05D000092 ORTHO05D000042 1.0e-06 56.6 73 49.3
FvH4_5g02660 Fragaria vesca HOM05D000092 ORTHO05D000042 1.3e-06 56.2 70 47.1
FAN07G0665 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.3e-06 56.2 70 48.6
RcHm_v2.0_Chr2g0085111 Rosa chinensis HOM05D000092 ORTHO05D000042 1.3e-06 56.2 77 48.1
FvH4_4g06021 Fragaria vesca HOM05D000092 ORTHO05D000042 1.7e-06 55.8 70 45.7
FAN17G2124 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.3e-06 55.5 70 47.1
FAN18G2140 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.0e-06 55.1 70 47.1
RcHm_v2.0_Chr7g0202501 Rosa chinensis HOM05D000092 ORTHO05D000042 3.0e-06 55.1 41 63.4
FvH4_1g07760 Fragaria vesca HOM05D000092 ORTHO05D000042 3.9e-06 54.7 70 45.7
FAN12G2792 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.9e-06 54.7 70 45.7
RcHm_v2.0_Chr1g0356991 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 54.3 62 53.2
FvH4_4g06020 Fragaria vesca HOM05D000092 ORTHO05D000042 8.6e-06 53.5 70 44.3
Prupe.4G236500 Prunus persica HOM05D000092 ORTHO05D000042 8.6e-06 53.5 61 52.5


User provided reference genes

Program Settings