Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0481791 Rosa chinensis HOM05D000041 ORTHO05D000061 1.4e-34 149.1 74 100.0
RcHm_v2.0_Chr2g0165531 Rosa chinensis HOM05D000041 ORTHO05D000061 8.7e-29 129.8 74 83.8
FvH4_6g46680 Fragaria vesca HOM05D000041 ORTHO05D000061 1.3e-27 125.9 74 82.4
FAN09G2911 Fragaria x ananassa HOM05D000041 ORTHO05D000061 1.3e-27 125.9 74 82.4
FAN14G3771 Fragaria x ananassa HOM05D000041 ORTHO05D000061 2.8e-27 124.8 72 83.3
RcHm_v2.0_Chr2g0165431 Rosa chinensis HOM05D000041 ORTHO05D000061 9.9e-25 116.3 74 78.4
RcHm_v2.0_Chr3g0481811 Rosa chinensis HOM05D000041 ORTHO05D000061 7.1e-23 110.2 74 75.7
RcHm_v2.0_Chr7g0211011 Rosa chinensis HOM05D000041 ORTHO05D000061 9.3e-23 109.8 74 75.7
RcHm_v2.0_Chr2g0165521 Rosa chinensis HOM05D000041 ORTHO05D000061 2.7e-22 108.2 74 74.3
RcHm_v2.0_Chr4g0400311 Rosa chinensis HOM05D000041 ORTHO05D000061 3.5e-22 107.8 74 71.6
RcHm_v2.0_Chr3g0481631 Rosa chinensis HOM05D000041 ORTHO05D000061 6.0e-22 107.1 74 74.3
FvH4_6g46610 Fragaria vesca HOM05D000041 ORTHO05D000061 1.3e-19 99.4 74 68.9
FvH4_6g46640 Fragaria vesca HOM05D000041 ORTHO05D000061 2.1e-19 98.6 74 68.9
FAN14G2369 Fragaria x ananassa HOM05D000041 ORTHO05D000061 3.6e-19 97.8 74 67.6
FAN05G2231 Fragaria x ananassa HOM05D000041 ORTHO05D000061 5.8e-17 90.5 74 63.5
RcHm_v2.0_Chr2g0165511 Rosa chinensis HOM05D000041 ORTHO05D000061 2.9e-16 88.2 74 59.5
FvH4_6g46620 Fragaria vesca HOM05D000041 ORTHO05D000061 3.5e-14 81.3 74 56.8
FAN05G2142 Fragaria x ananassa HOM05D000041 ORTHO05D000061 6.0e-14 80.5 73 56.2
RcHm_v2.0_Chr3g0481821 Rosa chinensis HOM05D000041 ORTHO05D000061 1.9e-12 75.5 74 55.4
MD17G1061900 Malus domestica HOM05D000041 ORTHO05D000061 4.8e-11 70.9 74 52.7
MD17G1060300 Malus domestica HOM05D000041 ORTHO05D000061 1.1e-10 69.7 74 52.7
FAN02G1021 Fragaria x ananassa HOM05D000041 ORTHO05D000061 1.8e-10 68.9 59 59.3
Prupe.3G251900 Prunus persica HOM05D000041 ORTHO05D000061 5.3e-10 67.4 74 51.4
MD03G1063600 Malus domestica HOM05D000041 ORTHO05D000061 1.2e-09 66.2 74 51.4
MD17G1062100 Malus domestica HOM05D000041 ORTHO05D000061 1.2e-09 66.2 74 52.7
MD17G1063000 Malus domestica HOM05D000041 ORTHO05D000061 2.6e-09 65.1 74 50.0
MD09G1069400 Malus domestica HOM05D000041 ORTHO05D000061 3.4e-09 64.7 75 53.3
MD17G1063600 Malus domestica HOM05D000041 ORTHO05D000061 4.5e-09 64.3 74 51.4
Prupe.3G251000 Prunus persica HOM05D000041 ORTHO05D000061 7.6e-09 63.5 86 47.7
Prupe.3G251400 Prunus persica HOM05D000041 ORTHO05D000061 7.6e-09 63.5 86 45.3
MD17G1063200 Malus domestica HOM05D000041 ORTHO05D000061 2.9e-08 61.6 101 37.6
FvH4_6g46580 Fragaria vesca HOM05D000041 ORTHO05D000061 6.5e-08 60.5 104 38.5
FAN02G3789 Fragaria x ananassa HOM05D000041 ORTHO05D000061 3.2e-07 58.2 104 35.6
RcHm_v2.0_Chr1g0321851 Rosa chinensis HOM05D000041 ORTHO05D000061 9.3e-07 56.6 86 43.0
Duzib138G1447 Durio zibethinus HOM05D000041 ORTHO05D000061 1.2e-06 56.2 100 41.0
RcHm_v2.0_Chr1g0321911 Rosa chinensis HOM05D000041 ORTHO05D000061 1.6e-06 55.8 86 44.2
Prupe.3G251100 Prunus persica HOM05D000041 ORTHO05D000061 2.1e-06 55.5 104 37.5
RcHm_v2.0_Chr1g0323951 Rosa chinensis HOM05D000041 ORTHO05D000061 2.1e-06 55.5 79 41.8
RcHm_v2.0_Chr2g0165311 Rosa chinensis HOM05D000041 ORTHO05D000061 3.5e-06 54.7 104 35.6
Thecc.04G101800 Theobroma cacao HOM05D000041 ORTHO05D000061 6.0e-06 53.9 100 40.0
RcHm_v2.0_Chr2g0164711 Rosa chinensis HOM05D000041 ORTHO05D000061 7.9e-06 53.5 86 41.9
RcHm_v2.0_Chr2g0165301 Rosa chinensis HOM05D000041 ORTHO05D000061 7.9e-06 53.5 103 38.8


User provided reference genes

Program Settings