Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 2.0e-100 369.0 176 100.0
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 3.6e-73 278.5 158 84.2
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 1.3e-70 270.0 158 81.0
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 5.0e-59 231.5 158 69.0
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 2.1e-57 226.1 158 68.4
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 6.1e-57 224.6 158 67.7
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 1.8e-56 223.0 158 69.6
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 2.3e-56 222.6 158 65.2
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 6.8e-56 221.1 158 67.7
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 1.5e-55 219.9 158 65.8
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 4.4e-55 218.4 158 68.4
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 4.4e-55 218.4 158 68.4
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 2.2e-54 216.1 158 65.2
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.2e-54 216.1 155 68.4
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 6.4e-54 214.5 158 67.7
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.1e-53 213.8 158 63.9
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.2e-52 210.3 158 63.3
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 3.0e-51 205.7 158 59.5
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 1.5e-50 203.4 158 61.4
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 9.5e-50 200.7 158 65.2
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 2.3e-48 196.1 158 59.5
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 5.2e-48 194.9 188 54.8
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 8.9e-48 194.1 158 57.0
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 2.6e-47 192.6 158 58.9
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 9.8e-47 190.7 158 56.3
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 8.3e-46 187.6 159 54.1
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 8.3e-46 187.6 159 55.3
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 1.3e-43 180.3 159 56.0
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 3.6e-41 172.2 155 53.5
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.5e-39 166.8 155 51.0
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 4.4e-39 165.2 155 51.0
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 9.9e-39 164.1 158 54.4
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 3.7e-38 162.2 159 49.1
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 5.2e-32 141.7 106 64.2
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.7e-30 136.7 161 46.0
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 3.2e-29 132.5 158 39.9
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 4.1e-29 132.1 158 39.2
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 1.6e-28 130.2 158 39.9
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 5.6e-26 121.7 154 38.3
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 1.2e-25 120.6 155 38.1
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 9.0e-24 114.4 94 57.4
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 1.0e-19 100.9 111 42.3
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 3.6e-17 92.4 100 45.0
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 5.4e-13 78.6 76 51.3
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 1.1e-08 64.3 54 48.1
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 1.1e-08 64.3 86 37.2
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 1.7e-06 57.0 36 69.4


User provided reference genes

Program Settings