Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 2.8e-210 734.9 356 100.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 3.0e-204 714.9 356 96.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.0e-204 714.9 356 96.6
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.0e-204 714.5 356 96.6
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.7e-202 708.0 356 96.1
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 6.6e-191 670.6 360 89.7
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.0e-188 661.8 360 86.9
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.0e-188 661.8 360 86.9
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 3.0e-188 661.8 360 87.8
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.4e-187 658.3 360 86.1
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 4.4e-187 657.9 360 86.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 4.4e-187 657.9 360 86.7
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 9.8e-187 656.8 360 86.4
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 9.8e-187 656.8 360 86.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.7e-186 656.0 360 86.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.7e-186 656.0 360 86.7
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.2e-186 655.6 360 86.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.8e-186 655.2 360 86.4
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.9e-186 654.4 356 87.4
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.8e-185 652.5 360 86.4
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.4e-185 652.1 360 85.3
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 5.4e-185 651.0 359 85.8
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 7.0e-185 650.6 356 86.8
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 9.2e-185 650.2 360 85.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.2e-184 649.8 358 87.2
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 2.7e-184 648.7 360 85.3
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 4.5e-184 647.9 360 85.3
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.0e-183 646.7 358 85.8
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.0e-183 646.7 360 85.0
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.3e-183 645.6 360 85.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 3.9e-183 644.8 358 85.8
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 6.6e-183 644.0 358 84.4
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 6.6e-183 644.0 360 84.2
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 8.6e-183 643.7 360 84.7
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.1e-182 643.3 360 84.2
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.5e-182 642.9 356 86.2
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.5e-182 642.9 356 85.1
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 3.3e-182 641.7 357 85.2
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.3e-182 641.7 360 84.2
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 4.3e-182 641.3 361 84.2
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 5.6e-182 641.0 353 85.6
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 7.3e-182 640.6 357 84.9
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 9.5e-182 640.2 360 83.9
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.1e-181 639.0 360 83.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.8e-181 638.6 360 83.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 3.6e-181 638.3 357 84.0
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 4.7e-181 637.9 360 85.3
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 4.7e-181 637.9 358 85.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 6.1e-181 637.5 358 83.5
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.0e-180 636.7 360 84.4
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 2.3e-180 635.6 360 84.4
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.3e-180 635.6 360 83.9
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 8.9e-180 633.6 395 78.5
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.5e-179 632.9 360 83.1
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.6e-179 632.1 357 83.8
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 4.4e-179 631.3 356 84.6
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 5.8e-179 630.9 356 82.6
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 9.8e-179 630.2 382 80.4
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 4.9e-178 627.9 358 82.7
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.1e-177 626.7 355 83.7
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.4e-177 626.3 360 82.2
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 5.4e-177 624.4 358 81.8
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 5.4e-177 624.4 358 81.8
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 7.0e-177 624.0 370 81.6
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 9.2e-177 623.6 360 81.9
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.2e-176 623.2 416 75.0
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 4.6e-176 621.3 400 76.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 6.0e-176 620.9 358 81.3
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.7e-175 619.4 358 81.0
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.7e-175 619.4 358 81.0
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.7e-175 619.4 358 81.0
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.7e-175 619.4 360 81.1
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 2.3e-175 619.0 358 80.7
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.3e-175 619.0 358 81.3
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 80.4
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.5e-174 616.3 360 81.4
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.3e-174 615.1 357 82.6
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 3.3e-174 615.1 360 80.8
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 4.3e-174 614.8 427 72.4
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 4.7e-173 611.3 356 80.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 3.1e-172 608.6 386 75.6
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.5e-171 606.3 338 84.3
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 3.4e-171 605.1 357 79.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 9.8e-171 603.6 359 79.4
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.9e-170 602.1 361 78.9
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 6.4e-170 600.9 359 78.8
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 8.3e-170 600.5 359 78.8
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 8.3e-170 600.5 361 78.7
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.4e-169 599.7 355 79.7
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 4.1e-169 598.2 348 80.2
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 1.2e-165 586.6 358 78.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 2.1e-165 585.9 314 89.5
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 2.1e-165 585.9 365 74.2
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 4.7e-165 584.7 365 73.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 1.2e-157 560.1 355 74.1
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.6e-155 552.4 336 78.0
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.4e-155 551.6 360 75.3
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.9e-153 546.2 305 87.9
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 2.4e-153 545.8 311 83.0
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 3.0e-151 538.9 301 86.0
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.9e-145 519.6 356 68.8
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 3.5e-144 515.4 353 72.8
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 6.0e-144 514.6 353 70.0
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 6.9e-140 501.1 357 68.1
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.3e-138 496.9 355 65.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 2.2e-138 496.1 402 63.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 3.2e-129 465.7 253 88.9
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-127 459.9 364 65.7
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.7e-127 458.0 241 92.1
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 8.7e-127 457.6 362 61.6
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.5e-126 456.8 360 65.3
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 5.5e-113 411.8 238 82.8
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 3.6e-104 382.5 206 86.4
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.2e-101 373.2 205 86.8
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 6.6e-74 282.0 180 78.9
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 6.2e-64 248.8 151 73.5
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 3.9e-58 229.6 125 85.6
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 7.3e-57 225.3 153 68.0
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.8e-55 220.7 119 82.4
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 3.3e-49 199.9 322 38.8
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 9.5e-49 198.4 203 55.2
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 3.4e-38 163.3 98 81.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.3e-34 150.6 117 66.7
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 5.4e-28 129.4 59 98.3
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 5.8e-22 109.4 111 55.0
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.8e-18 97.8 79 63.3
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.2e-14 85.1 37 97.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.4e-12 78.2 162 35.8
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 4.2e-12 76.6 50 64.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 6.7e-10 69.3 264 26.9


User provided reference genes

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