Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.1e-96 356.7 179 100.0
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.5e-50 203.4 157 75.2
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-50 203.4 157 75.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-50 203.4 157 75.2
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.7e-50 201.4 157 75.2
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 5.7e-50 201.4 156 75.6
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-49 199.5 157 74.5
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.1e-48 195.3 157 73.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.7e-44 182.6 157 68.8
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 6.7e-43 177.9 157 67.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 8.8e-43 177.6 157 67.5
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.1e-42 177.2 157 66.9
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.3e-42 175.6 157 67.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 5.7e-42 174.9 155 67.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 5.7e-42 174.9 159 64.2
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 7.4e-42 174.5 157 65.6
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.3e-41 173.7 159 64.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.7e-41 173.3 157 66.2
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.7e-41 173.3 157 65.6
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 8.2e-41 171.0 147 68.7
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 8.2e-41 171.0 157 65.6
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.1e-40 170.6 157 65.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.1e-40 170.6 157 65.6
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.1e-40 170.6 157 65.0
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.4e-40 170.2 157 65.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.4e-40 170.2 142 70.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.4e-40 169.5 157 65.6
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 2.4e-40 169.5 157 63.7
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 3.1e-40 169.1 157 64.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 3.1e-40 169.1 157 63.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 3.1e-40 169.1 155 65.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 4.1e-40 168.7 157 63.7
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 4.1e-40 168.7 157 65.0
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 5.3e-40 168.3 157 64.3
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 9.1e-40 167.5 157 63.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.2e-39 167.2 157 65.0
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.2e-39 167.2 157 63.7
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.5e-39 166.8 156 65.4
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.5e-39 166.8 156 63.5
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 5.9e-39 164.9 156 65.4
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.7e-39 164.5 155 63.2
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.0e-38 164.1 157 63.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.3e-38 163.7 157 62.4
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.2e-38 162.9 156 61.5
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.2e-38 162.9 157 63.7
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.9e-38 162.5 157 63.7
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.0e-38 161.8 157 63.7
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 6.5e-38 161.4 157 62.4
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 6.5e-38 161.4 153 64.1
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 8.5e-38 161.0 157 63.1
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 8.5e-38 161.0 157 63.1
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 8.5e-38 161.0 157 63.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.4e-37 160.2 156 60.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.4e-37 160.2 153 62.7
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.5e-37 159.5 155 61.9
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.5e-37 159.5 157 61.8
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.2e-37 159.1 157 62.4
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 5.5e-37 158.3 152 63.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 7.2e-37 157.9 153 62.7
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.6e-36 156.8 156 61.5
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.6e-36 156.8 155 60.6
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.6e-36 156.8 155 61.9
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.1e-36 156.4 153 62.7
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.7e-36 156.0 155 61.9
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.6e-36 155.6 155 60.0
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.9e-36 154.5 155 60.0
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.4e-35 153.7 142 62.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.3e-35 152.9 156 59.0
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.0e-35 152.5 174 54.0
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 5.1e-35 151.8 153 60.8
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 8.8e-35 151.0 156 60.9
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.1e-34 150.6 157 56.7
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.1e-34 150.6 157 59.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.5e-34 150.2 157 60.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.0e-34 149.8 157 56.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.0e-34 149.8 157 56.1
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 2.0e-34 149.8 153 59.5
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 5.7e-34 148.3 157 56.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.3e-33 147.1 153 58.2
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 2.2e-33 146.4 157 57.3
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.8e-33 146.0 153 60.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.8e-33 146.0 156 55.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.8e-33 146.0 156 55.8
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 2.8e-33 146.0 156 55.8
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 4.8e-33 145.2 157 55.4
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 4.8e-33 145.2 157 55.4
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 4.8e-33 145.2 157 55.4
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 4.8e-33 145.2 157 55.4
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 4.8e-33 145.2 157 55.4
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 6.3e-33 144.8 157 55.4
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 6.3e-33 144.8 157 55.4
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.4e-32 142.9 157 53.5
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 9.1e-32 141.0 151 57.0
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 5.9e-31 138.3 153 57.5
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 5.9e-31 138.3 229 44.5
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 3.2e-29 132.5 156 52.6
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 3.6e-28 129.0 140 53.6
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.7e-27 124.8 132 56.8
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 6.7e-27 124.8 174 48.9
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.1e-24 117.5 120 57.5
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.4e-24 116.3 114 58.8
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 3.1e-16 89.4 105 53.3
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.9e-14 82.8 151 38.4
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 3.6e-12 75.9 153 33.3
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.0e-11 74.3 142 37.3
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.3e-11 73.2 57 70.2
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.2e-11 72.0 142 35.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 8.8e-11 71.2 57 70.2
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.8e-08 63.5 141 33.3


User provided reference genes

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