Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0476231 Rosa chinensis HOM05D004770 ORTHO05D005572 6.3e-61 237.3 122 100.0
RcHm_v2.0_Chr6g0290401 Rosa chinensis HOM05D004770 ORTHO05D005572 1.1e-52 209.9 114 94.7
FAN20G2343 Fragaria x ananassa HOM05D004770 ORTHO05D005572 3.3e-49 198.4 114 90.4
FAN27G1754 Fragaria x ananassa HOM05D004770 ORTHO05D005572 7.5e-46 187.2 118 83.1
MD11G1280900 Malus domestica HOM05D004770 ORTHO05D005572 9.2e-44 180.3 114 83.3
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla HOM05D004770 ORTHO05D005572 2.3e-42 175.6 108 82.4
Potri.002G049900 Populus trichocarpa HOM05D004770 ORTHO05D005572 5.1e-42 174.5 108 80.6
Rhsim13G0027500 Rhododendron simsii HOM05D004770 ORTHO05D005572 5.1e-42 174.5 119 77.3
Lj2g0018175 Lotus japonicus HOM05D004770 ORTHO05D005572 6.6e-42 174.1 121 76.0
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 6.6e-42 174.1 109 82.6
ECA248G2232 Erigeron canadensis HOM05D004770 ORTHO05D005572 1.1e-41 173.3 108 80.6
Potri.005G212800 Populus trichocarpa HOM05D004770 ORTHO05D005572 1.1e-41 173.3 109 82.6
CSS0005681 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.9e-41 172.6 108 82.4
Lalb_Chr18g0051481 Lupinus albus HOM05D004770 ORTHO05D005572 1.9e-41 172.6 108 79.6
Atru.chr5.1488 Acer truncatum HOM05D004770 ORTHO05D005572 2.5e-41 172.2 108 81.5
Ciclev10022091m.g Citrus clementina HOM05D004770 ORTHO05D005572 2.5e-41 172.2 108 79.6
Cfa006174 Carpinus fangiana HOM05D004770 ORTHO05D005572 3.3e-41 171.8 108 81.5
Nitab4.5_0000759g0280 Nicotiana tabacum HOM05D004770 ORTHO05D005572 3.3e-41 171.8 108 81.5
TWI39G0629 Tripterygium wilfordii HOM05D004770 ORTHO05D005572 3.3e-41 171.8 108 79.6
CiPaw.07G089000 Carya illinoinensis HOM05D004770 ORTHO05D005572 5.6e-41 171.0 108 80.6
Dinv34783 Davidia involucrata HOM05D004770 ORTHO05D005572 5.6e-41 171.0 108 79.6
Peaxi162Scf00783g00122 Petunia axillaris HOM05D004770 ORTHO05D005572 5.6e-41 171.0 108 78.7
Glyma.18G056100 Glycine max HOM05D004770 ORTHO05D005572 9.5e-41 170.2 104 83.7
Manes.01G205200 Manihot esculenta HOM05D004770 ORTHO05D005572 9.5e-41 170.2 108 80.6
Medtr3g465790 Medicago truncatula HOM05D004770 ORTHO05D005572 9.5e-41 170.2 121 74.4
Thecc.01G273700 Theobroma cacao HOM05D004770 ORTHO05D005572 9.5e-41 170.2 108 79.6
Nitab4.5_0004355g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.2e-40 169.9 108 81.5
Lj1A49T61 Lonicera japonica HOM05D004770 ORTHO05D005572 1.6e-40 169.5 108 79.6
Cc01_g06090 Coffea canephora HOM05D004770 ORTHO05D005572 2.8e-40 168.7 108 78.7
Phvul.006G075100 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 2.8e-40 168.7 108 80.6
QL01p010878 Quercus lobata HOM05D004770 ORTHO05D005572 2.8e-40 168.7 108 77.8
CSS0032403 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 4.7e-40 167.9 108 80.6
Nn1g02388 Nelumbo nucifera HOM05D004770 ORTHO05D005572 4.7e-40 167.9 106 81.1
CANSAT80G2828 Cannabis sativa HOM05D004770 ORTHO05D005572 6.2e-40 167.5 110 77.3
HanXRQChr08g0213371 Helianthus annuus HOM05D004770 ORTHO05D005572 8.1e-40 167.2 108 77.8
PSO832G1010 Papaver somniferum HOM05D004770 ORTHO05D005572 8.1e-40 167.2 114 75.4
Sopen06g035540 Solanum pennellii HOM05D004770 ORTHO05D005572 1.1e-39 166.8 109 79.8
PGSC0003DMG400020135 Solanum tuberosum HOM05D004770 ORTHO05D005572 1.1e-39 166.8 109 79.8
TPR.G25688 Trifolium pratense HOM05D004770 ORTHO05D005572 1.1e-39 166.8 121 72.7
GSVIVG01001190001 Vitis vinifera HOM05D004770 ORTHO05D005572 1.1e-39 166.8 108 77.8
Psat2g184920 Pisum sativum HOM05D004770 ORTHO05D005572 1.4e-39 166.4 121 72.7
vmacro02598 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 1.4e-39 166.4 108 78.7
Actinidia24914 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.8e-39 166.0 108 78.7
Ca_15021_v3 Cicer arietinum L. HOM05D004770 ORTHO05D005572 1.8e-39 166.0 115 74.8
MELO3C015367.2 Cucumis melo HOM05D004770 ORTHO05D005572 1.8e-39 166.0 109 78.0
AUR62032312 Chenopodium quinoa HOM05D004770 ORTHO05D005572 2.3e-39 165.6 108 76.9
ClCG03G016560 Citrullus lanatus HOM05D004770 ORTHO05D005572 2.3e-39 165.6 109 77.1
Lsat_1_v5_gn_5_186200 Lactuca sativa HOM05D004770 ORTHO05D005572 2.3e-39 165.6 98 85.7
Phvul.007G249400 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 2.3e-39 165.6 105 81.0
VMungo0540G0250 Vigna mungo HOM05D004770 ORTHO05D005572 3.1e-39 165.2 108 78.7
DCAR_002713 Daucus carota HOM05D004770 ORTHO05D005572 4.0e-39 164.9 108 79.6
Nn6g34126 Nelumbo nucifera HOM05D004770 ORTHO05D005572 4.0e-39 164.9 108 77.8
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 4.0e-39 164.9 108 75.9
ATR0665G226 Amborella trichopoda HOM05D004770 ORTHO05D005572 5.2e-39 164.5 108 76.9
Solyc06g084160.4 Solanum lycopersicum HOM05D004770 ORTHO05D005572 5.2e-39 164.5 109 78.9
VMungo0720G0347 Vigna mungo HOM05D004770 ORTHO05D005572 6.8e-39 164.1 108 78.7
DCAR_012498 Daucus carota HOM05D004770 ORTHO05D005572 8.9e-39 163.7 108 76.9
Lj3A581T22 Lonicera japonica HOM05D004770 ORTHO05D005572 8.9e-39 163.7 108 77.8
PGR031G3940 Punica granatum HOM05D004770 ORTHO05D005572 8.9e-39 163.7 108 75.0
Duzib138G1187 Durio zibethinus HOM05D004770 ORTHO05D005572 1.2e-38 163.3 103 82.5
Sc05g0001180 Simmondsia chinensis HOM05D004770 ORTHO05D005572 1.2e-38 163.3 108 75.0
Eucgr.G02085 Eucalyptus grandis HOM05D004770 ORTHO05D005572 1.5e-38 162.9 108 79.6
TAR362G0723 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.5e-38 162.9 108 75.9
Oeu025750.1 Olea europaea HOM05D004770 ORTHO05D005572 2.0e-38 162.5 103 80.6
PSO170G2661 Papaver somniferum HOM05D004770 ORTHO05D005572 2.0e-38 162.5 108 76.9
Gohir.A12G003600 Gossypium hirsutum HOM05D004770 ORTHO05D005572 2.6e-38 162.2 108 78.7
SalBow7G1168 Salvia bowleyana HOM05D004770 ORTHO05D005572 2.6e-38 162.2 108 75.0
PSO210G1988 Papaver somniferum HOM05D004770 ORTHO05D005572 3.4e-38 161.8 108 76.9
CAN.G1549.14 Capsicum annuum HOM05D004770 ORTHO05D005572 4.4e-38 161.4 109 77.1
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 4.4e-38 161.4 108 74.1
AT5G26110 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 5.8e-38 161.0 108 76.9
CsaV3_1G039420 Cucumis sativus L. HOM05D004770 ORTHO05D005572 5.8e-38 161.0 104 78.8
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 5.8e-38 161.0 106 78.3
PGSC0003DMG400017838 Solanum tuberosum HOM05D004770 ORTHO05D005572 5.8e-38 161.0 108 75.9
EL10Ac5g10525 Beta vulgaris HOM05D004770 ORTHO05D005572 7.6e-38 160.6 108 76.9
Migut.D00330 Erythranthe guttata HOM05D004770 ORTHO05D005572 7.6e-38 160.6 109 76.1
Aqoxy2G03435 Aquilegia oxysepala HOM05D004770 ORTHO05D005572 9.9e-38 160.2 121 70.2
Cpa.g.sc41.63 Carica papaya HOM05D004770 ORTHO05D005572 9.9e-38 160.2 104 78.8
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 9.9e-38 160.2 97 83.5
SGA_v2.0_scaffold1G00513 Striga asiatica HOM05D004770 ORTHO05D005572 9.9e-38 160.2 108 72.2
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.3e-37 159.8 97 84.5
BcaNung03978 Brassica carinata HOM05D004770 ORTHO05D005572 1.3e-37 159.8 108 76.9
Gorai.008G003100 Gossypium raimondii HOM05D004770 ORTHO05D005572 1.3e-37 159.8 108 76.9
Nitab4.5_0000208g0100 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.3e-37 159.8 108 73.1
Solyc08g005140.3 Solanum lycopersicum HOM05D004770 ORTHO05D005572 1.3e-37 159.8 108 75.0
BcaNung02803 Brassica carinata HOM05D004770 ORTHO05D005572 1.7e-37 159.5 108 77.8
BolC7t44719H Brassica oleracea HOM05D004770 ORTHO05D005572 1.7e-37 159.5 108 77.8
Carub.0006s2388 Capsella rubella HOM05D004770 ORTHO05D005572 1.7e-37 159.5 108 75.0
Gohir.D12G003300 Gossypium hirsutum HOM05D004770 ORTHO05D005572 1.7e-37 159.5 108 76.9
Sopen08g001150 Solanum pennellii HOM05D004770 ORTHO05D005572 1.7e-37 159.5 108 75.0
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea HOM05D004770 ORTHO05D005572 2.2e-37 159.1 99 81.8
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea HOM05D004770 ORTHO05D005572 2.2e-37 159.1 99 81.8
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea HOM05D004770 ORTHO05D005572 2.9e-37 158.7 99 81.8
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea HOM05D004770 ORTHO05D005572 2.9e-37 158.7 99 80.8
A06p36610 Brassica napus HOM05D004770 ORTHO05D005572 2.9e-37 158.7 108 75.9
BraA06t26586Z Brassica rapa HOM05D004770 ORTHO05D005572 2.9e-37 158.7 108 75.9
Sed0021970 Sechium edule HOM05D004770 ORTHO05D005572 2.9e-37 158.7 102 80.4
Thhalv10004885m.g Eutrema salsugineum HOM05D004770 ORTHO05D005572 3.7e-37 158.3 100 79.0
C07p41870 Brassica napus HOM05D004770 ORTHO05D005572 4.9e-37 157.9 108 76.9
AL2G11930 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 6.4e-37 157.5 108 74.1
SalBow4G2779 Salvia bowleyana HOM05D004770 ORTHO05D005572 6.4e-37 157.5 108 73.1
Sp2g21620 Schrenkiella parvula HOM05D004770 ORTHO05D005572 8.3e-37 157.1 98 81.6
vmacro14906 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 8.3e-37 157.1 108 75.9
Aa31LG10G17080 Aethionema arabicum HOM05D004770 ORTHO05D005572 1.4e-36 156.4 108 74.1
Migut.N02033 Erythranthe guttata HOM05D004770 ORTHO05D005572 1.9e-36 156.0 108 72.2
Nitab4.5_0006132g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 3.2e-36 155.2 108 72.2
Carub.0005s0602 Capsella rubella HOM05D004770 ORTHO05D005572 7.1e-36 154.1 109 74.3
Hund02843 Selenicereus undatus HOM05D004770 ORTHO05D005572 1.6e-35 152.9 108 71.3
CARHR187390 Cardamine hirsuta HOM05D004770 ORTHO05D005572 2.1e-35 152.5 108 71.3
THA.LOC104817561 Tarenaya hassleriana HOM05D004770 ORTHO05D005572 2.1e-35 152.5 98 75.5
HPP92_017651 Vanilla planifolia HOM05D004770 ORTHO05D005572 2.1e-35 152.5 108 70.4
MBI02_g08255_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 1.0e-34 150.2 96 79.2
COL.COLO4_09057 Corchorus olitorius HOM05D001769 ORTHO05D001695 1.3e-34 149.8 88 85.2
Lj3g0010058 Lotus japonicus HOM05D004770 ORTHO05D005572 1.7e-34 149.4 110 72.7
Zm00001eb222890 Zea mays HOM05D004770 ORTHO05D005572 1.9e-33 146.0 108 69.4
AUR62012543 Chenopodium quinoa HOM05D004770 ORTHO05D005572 7.3e-33 144.1 87 82.8
Lsat_1_v5_gn_3_83521 Lactuca sativa HOM05D004770 ORTHO05D005572 1.6e-32 142.9 98 77.6
SEGI_22603 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 1.2e-30 136.7 106 65.1
SHI22269 Sapria himalayana HOM05D004770 ORTHO05D005572 5.8e-30 134.4 86 75.6
Haze_04673 Corylus avellana HOM05D004770 ORTHO05D005572 7.6e-30 134.0 108 67.6
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 1.3e-29 133.3 106 64.2
MBI15_g39353_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 1.9e-28 129.4 86 75.6
SMO358G0317 Selaginella moellendorffii HOM05D004770 ORTHO05D005572 9.3e-28 127.1 111 60.4
Pp3c15_20330 Physcomitrium patens HOM05D004770 ORTHO05D005572 1.0e-26 123.6 94 66.0
Mapoly0133s0052 Marchantia polymorpha HOM05D004770 ORTHO05D005572 2.3e-26 122.5 105 63.8
Actinidia21134 Actinidia chinensis HOM05D004770 ORTHO05D005572 8.7e-26 120.6 87 72.4
Manes.05G078700 Manihot esculenta HOM05D004770 ORTHO05D005572 1.8e-23 112.8 108 60.2
CSS0010466 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.5e-22 109.8 71 76.1
TAR633G1205 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.5e-22 109.8 112 57.1
CAN.G1549.26 Capsicum annuum HOM05D004770 ORTHO05D005572 1.1e-20 103.6 108 55.6
CBR_g40454 Chara braunii HOM05D004770 ORTHO05D005572 7.1e-20 100.9 87 58.6
AagrBONN_evm.TU.Sc2ySwM_362.2288 Anthoceros agrestis HOM05D004770 ORTHO05D005572 1.0e-18 97.1 87 58.6
MCO10G359 Micromonas commoda HOM05D004770 ORTHO05D005572 7.3e-17 90.9 114 46.5
FvH4_2g23150 Fragaria vesca HOM05D004770 ORTHO05D005572 2.8e-16 89.0 51 86.3
AT1G08120 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 1.2e-14 83.6 70 68.6
Glyma.17G044400 Glycine max HOM05D004770 ORTHO05D005572 4.5e-14 81.6 64 71.9
Psat6g025640 Pisum sativum HOM05D004770 ORTHO05D005572 5.8e-14 81.3 64 71.9
RcHm_v2.0_Chr5g0022281 Rosa chinensis HOM05D042667 ORTHO05D005572 1.7e-13 79.7 63 71.4
CDE04G0604 Ceratophyllum demersum HOM05D004770 ORTHO05D005572 4.2e-12 75.1 49 75.5
Lj6g0011383 Lotus japonicus HOM05D004770 ORTHO05D005572 7.1e-12 74.3 58 69.0
QL01p011010 Quercus lobata HOM05D004770 ORTHO05D005572 4.6e-11 71.6 45 80.0
RcHm_v2.0_Chr5g0022321 Rosa chinensis HOM05D042667 ORTHO05D005572 3.3e-09 65.5 56 67.9
AL2G11990 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 1.6e-08 63.2 45 64.4
Zm00001eb432290 Zea mays HOM05D004770 ORTHO05D005572 2.8e-08 62.4 45 71.1
Actinidia09114 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.1e-07 60.5 45 68.9
Sp5g00290 Schrenkiella parvula HOM05D004770 ORTHO05D005572 1.1e-07 60.5 42 69.0
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 2.4e-07 59.3 52 55.8
Glyma.02G191000 Glycine max HOM05D004770 ORTHO05D005572 5.8e-06 54.7 30 86.7


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