Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 9.2e-127 456.8 219 100.0
FvH4_6g20250 Fragaria vesca HOM05D015804 ORTHO05D010800 3.6e-83 312.0 228 74.1
FAN14G2856 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.4e-82 310.1 228 73.7
FAN05G3991 Fragaria x ananassa HOM05D015804 ORTHO05D010800 3.9e-77 292.0 230 71.3
FAN05G1852 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.2e-73 280.4 232 68.1
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.9e-68 263.1 230 65.2
FAN09G0232 Fragaria x ananassa HOM05D015804 ORTHO05D010800 3.4e-65 252.3 230 64.8
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 2.0e-44 183.3 243 48.1
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 4.5e-33 145.6 246 41.1
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 1.7e-32 143.7 248 38.7
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 3.6e-30 136.0 259 39.0
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 1.0e-29 134.4 202 44.6
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 7.5e-28 128.3 244 40.2
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 1.2e-25 120.9 242 35.1
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 1.7e-24 117.1 256 35.9
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.8e-24 115.9 250 35.6
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 1.1e-23 114.4 262 34.7
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 3.2e-23 112.8 257 35.8
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 5.5e-23 112.1 245 35.5
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 5.2e-21 105.5 268 33.6
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 2.0e-20 103.6 251 34.7
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 3.4e-20 102.8 242 34.3
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 1.7e-19 100.5 281 33.1
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 8.3e-19 98.2 234 35.0
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 7.0e-18 95.1 189 38.1
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 1.3e-16 90.9 239 32.6
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 5.0e-16 89.0 262 32.4
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 1.9e-15 87.0 272 29.0
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 1.6e-14 84.0 176 36.4
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 1.0e-13 81.3 224 32.1
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 4.0e-13 79.3 261 30.7
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 9.8e-12 74.7 208 36.1
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 4.1e-10 69.3 140 35.7
Aqoxy1G00673 Aquilegia oxysepala HOM05D009231 ORTHO05D010800 2.9e-08 63.2 274 26.6
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 2.9e-08 63.2 62 51.6
ATR0772G209 Amborella trichopoda HOM05D009231 ORTHO05D010800 1.9e-07 60.5 256 29.3


User provided reference genes

Program Settings