Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 7.4e-192 673.7 338 100.0
FvH4_6g20211 Fragaria vesca HOM05D003379 ORTHO05D003862 2.4e-110 402.9 327 69.7
FAN05G5404 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.3e-105 386.3 316 69.0
FAN14G0132 Fragaria x ananassa HOM05D003379 ORTHO05D003862 6.6e-92 341.7 327 62.7
FAN05G4320 Fragaria x ananassa HOM05D003379 ORTHO05D003862 7.1e-62 241.9 172 73.3
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.4e-46 191.0 409 37.4
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.0e-44 184.9 414 39.4
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 3.0e-44 183.3 407 37.1
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 8.8e-44 181.8 423 36.6
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.0e-43 180.6 414 38.6
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 4.4e-43 179.5 416 38.5
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.8e-42 176.0 414 38.4
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 6.3e-34 149.1 429 33.1
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.0e-32 144.1 343 35.3
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 1.0e-31 141.7 401 32.2
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 1.9e-30 137.5 435 32.6
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 1.9e-30 137.5 434 32.7
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.5e-30 137.1 436 31.7
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 4.2e-30 136.3 406 31.5
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 1.6e-29 134.4 440 30.5
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 3.6e-29 133.3 436 29.6
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 8.0e-29 132.1 431 30.9
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.0e-28 131.7 431 30.6
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.8e-28 131.0 352 32.1
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 5.2e-28 129.4 427 31.9
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 1.2e-27 128.3 417 32.1
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 2.0e-27 127.5 420 31.7
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 4.4e-27 126.3 415 32.0
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.7e-26 124.4 419 29.8
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 2.8e-26 123.6 409 29.8
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 3.7e-26 123.2 431 30.9
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 6.3e-26 122.5 430 30.9
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 8.2e-26 122.1 346 30.6
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 1.1e-25 121.7 372 32.5
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 1.8e-25 120.9 426 30.5
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.8e-25 120.9 415 31.8
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 4.1e-25 119.8 394 32.5
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 1.2e-24 118.2 361 30.5
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 1.6e-24 117.9 367 30.8
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 2.0e-24 117.5 424 29.2
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 3.5e-24 116.7 378 32.0
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 5.9e-24 115.9 420 30.2
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 7.7e-24 115.5 422 31.5
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 1.7e-23 114.4 401 29.7
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 2.9e-23 113.6 439 27.8
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.9e-23 113.6 440 29.5
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 3.8e-23 113.2 359 30.1
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 1.1e-22 111.7 406 30.0
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.5e-22 111.3 358 29.9
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 1.5e-22 111.3 327 31.5
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.9e-22 110.9 442 29.4
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 4.2e-22 109.8 402 30.1
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 4.2e-22 109.8 440 29.3
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 7.2e-22 109.0 403 29.3
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 4.7e-21 106.3 340 33.2
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 8.0e-21 105.5 372 30.1
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 6.8e-20 102.4 298 31.5
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 2.6e-19 100.5 303 29.0
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 3.4e-19 100.1 411 28.0
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 4.4e-19 99.8 386 28.5
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 7.5e-19 99.0 301 30.6
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 7.5e-19 99.0 349 28.1
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 9.8e-19 98.6 410 27.6
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 1.7e-18 97.8 358 28.8
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 2.2e-18 97.4 407 29.2
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 3.7e-18 96.7 290 30.7
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 3.7e-18 96.7 411 28.0
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.7e-18 96.7 405 29.4
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 6.3e-18 95.9 358 29.9
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 6.3e-18 95.9 371 29.1
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 8.3e-18 95.5 348 27.3
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 8.3e-18 95.5 406 28.6
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 1.4e-17 94.7 369 28.7
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.4e-17 94.7 410 28.0
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 2.4e-17 94.0 370 28.9
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 2.4e-17 94.0 362 29.3
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 7.0e-17 92.4 407 28.7
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.2e-16 91.7 365 29.6
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.6e-16 91.3 415 28.7
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 2.0e-16 90.9 357 27.7
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 7.7e-16 89.0 326 28.5
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.7e-16 89.0 278 31.7
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 1.0e-15 88.6 310 28.7
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.3e-15 88.2 404 27.2
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 1.7e-15 87.8 417 25.2
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 2.3e-15 87.4 179 34.1
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 2.9e-15 87.0 374 27.8
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 3.8e-15 86.7 433 27.0
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 6.5e-15 85.9 415 24.8
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 8.6e-15 85.5 365 26.6
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 8.6e-15 85.5 362 27.3
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 1.5e-14 84.7 312 28.8
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.9e-14 84.3 340 29.1
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 3.3e-14 83.6 388 26.3
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 3.3e-14 83.6 337 29.4
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 3.3e-14 83.6 349 28.7
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 3.3e-14 83.6 401 26.9
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 4.2e-14 83.2 280 32.1
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 9.5e-14 82.0 191 32.5
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 1.2e-13 81.6 269 31.6
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 3.6e-13 80.1 361 25.8
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 3.6e-13 80.1 350 26.0
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 4.7e-13 79.7 405 25.4
FAN05G4592 Fragaria x ananassa HOM05D003379 ORTHO05D208422 6.1e-13 79.3 125 46.4
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 8.0e-13 79.0 338 26.6
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 8.0e-13 79.0 350 26.0
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.0e-12 78.6 328 29.0
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.4e-12 78.2 379 28.5
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 1.8e-12 77.8 363 25.6
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.8e-12 77.8 347 26.8
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.3e-12 77.4 362 26.8
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 3.0e-12 77.0 370 27.0
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 3.0e-12 77.0 352 26.7
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 5.2e-12 76.3 363 26.4
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 6.8e-12 75.9 403 27.0
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 6.8e-12 75.9 359 27.3
RcHm_v2.0_Chr2g0176501 Rosa chinensis HOM05D003379 ORTHO05D003862 6.8e-12 75.9 137 40.1
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.2e-11 75.1 353 26.1
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 1.2e-11 75.1 364 26.1
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 1.5e-11 74.7 355 27.6
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 2.0e-11 74.3 474 24.3
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 2.6e-11 73.9 241 29.9
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 2.6e-11 73.9 301 30.2
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 2.6e-11 73.9 352 26.4
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 3.4e-11 73.6 325 28.9
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 3.4e-11 73.6 370 25.4
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 7.5e-11 72.4 120 35.0
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 7.5e-11 72.4 440 24.8
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 7.5e-11 72.4 358 25.1
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 9.8e-11 72.0 235 28.9
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 9.8e-11 72.0 294 28.9
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 1.3e-10 71.6 369 24.9
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.7e-10 71.2 377 26.5
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.2e-10 70.9 404 26.7
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 2.8e-10 70.5 218 30.7
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 2.8e-10 70.5 424 27.1
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 3.7e-10 70.1 324 25.6
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 4.9e-10 69.7 407 26.8
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 8.3e-10 68.9 382 23.6
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 1.1e-09 68.6 322 27.3
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 1.1e-09 68.6 349 25.8
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 1.4e-09 68.2 359 27.3
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.8e-09 67.8 289 26.6
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 1.8e-09 67.8 358 25.1
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 3.1e-09 67.0 362 27.3
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 4.1e-09 66.6 352 23.9
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 1.6e-08 64.7 429 25.4
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 1.6e-08 64.7 349 23.5
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.5e-08 63.2 356 26.1
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 5.9e-08 62.8 386 25.6
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 5.9e-08 62.8 180 34.4
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.3e-07 61.6 390 24.1
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.7e-07 61.2 354 27.1
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 2.3e-07 60.8 349 26.1
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 2.9e-07 60.5 339 24.2
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.8e-07 60.1 349 26.1
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 6.6e-07 59.3 360 26.4
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.1e-06 58.5 367 24.0
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 3.3e-06 57.0 388 24.5
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 9.5e-06 55.5 386 25.6


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